C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: brain-enriched guanylate kinase-associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183092 BEGAIN 9606 - 14:100537149-100587413 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355173 BEGAIN-001 100537149-100569794 protein_coding
  ENST00000443071 BEGAIN-201 100537153-100568070 protein_coding
  ENST00000553553 BEGAIN-005 100538888-100568491 protein_coding
  ENST00000554140 BEGAIN-006 100539299-100587413 protein_coding
  ENST00000554274 BEGAIN-009 100543942-100545329 retained_intron
  ENST00000554356 BEGAIN-008 100539035-100548098 protein_coding
  ENST00000554747 BEGAIN-004 100546022-100569086 processed_transcript
  ENST00000556188 BEGAIN-003 100538888-100569558 protein_coding
  ENST00000556751 BEGAIN-002 100537153-100549889 protein_coding
  ENST00000557378 BEGAIN-007 100539248-100568070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355173ENST00000443071ENST00000554140ENST00000554274ENST00000554356ENST00000556188ENST00000556751
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355173 N/A N/A 0.029±0.00 N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443071 0.134±0.00 N/A N/A 5.831±0.00 N/A 0.120±0.00 N/A 0.179±0.00 0.105±0.00 0.378±0.00 0.100±0.00 1.513±1.27 0.469±0.00 1.581±0.00
ENST00000554140 N/A N/A N/A 1.587±0.00 N/A N/A N/A N/A N/A N/A N/A 0.148±0.00 0.818±0.00 1.769±0.49
ENST00000554274 N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A 0.403±0.00 N/A N/A
ENST00000554356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.861±0.00 N/A
ENST00000556188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A
ENST00000556751 0.010±0.00 0.172±0.00 N/A 0.368±0.26 0.077±0.00 0.023±0.01 0.041±0.03 0.056±0.00 N/A 0.042±0.01 N/A 0.280±0.18 0.125±0.00 0.220±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AA CIL_0004AA_0001 CGP 14:100376418-100587413
CIL_0007Q7 CIL_0007Q7_0001 VISTA 14:100481347-101081347
CIL_0004A9 CIL_0004A9_0001 CGP 14:100537149-100738224

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0016020 IEA membrane
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0030425 IEA dendrite
GO:0043025 IEA neuronal cell body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043673 BEGAIN (1 of 2) brain-enriched guanylate kinase-associated protein_coding Danio_rerio
ENSDARG00000089545 BEGAIN (2 of 2) brain-enriched guanylate kinase-associated protein_coding Danio_rerio
ENSMUSG00000040867 Begain brain-enriched guanylate kinase-associated protein_coding Mus_musculus

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