C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: brain-enriched guanylate kinase-associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443071 BEGAIN-201 ENSG00000183092 9606 - 14:100537153-100568070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000443071
Transcript ID Adipose Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000443071 0.134±0.00 5.831±0.00 0.120±0.00 0.179±0.00 0.105±0.00 0.378±0.00 0.100±0.00 1.513±1.27 0.469±0.00 1.581±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AA CIL_0004AA_0001 CGP 14:100376418-100587413
CIL_0007Q7 CIL_0007Q7_0001 VISTA 14:100481347-101081347
CIL_0004A9 CIL_0004A9_0001 CGP 14:100537149-100738224

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0016020 IEA membrane
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0030425 IEA dendrite
GO:0043025 IEA neuronal cell body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073156 Begain-201 protein_coding Mus_musculus 0 1888
ENSMUST00000190647 Begain-001 protein_coding Mus_musculus 0 1888
ENSMUST00000185745 Begain-002 processed_transcript Mus_musculus 0 353
ENSMUST00000187230 Begain-003 retained_intron Mus_musculus 0 255

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