C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: brain-enriched guanylate kinase-associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040867 Begain 10090 - 12:109032187-109068217 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073156 Begain-201 109032187-109068217 protein_coding
  ENSMUST00000185745 Begain-002 109037652-109053581 processed_transcript
  ENSMUST00000187230 Begain-003 109034610-109037087 retained_intron
  ENSMUST00000190647 Begain-001 109032187-109068217 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000185745ENSMUST00000187230ENSMUST00000190647
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000185745 N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A N/A N/A 0.246±0.13 N/A N/A N/A
ENSMUST00000187230 0.393±0.00 N/A N/A N/A 1.060±0.00 0.450±0.00 0.130±0.05 0.077±0.03 0.229±0.00 1.194±0.00 0.113±0.04 0.643±0.09 0.180±0.02 N/A
ENSMUST00000190647 1.498±0.76 1.202±0.61 0.292±0.15 26.492±15.98 1.986±1.00 0.629±0.13 0.062±0.01 0.113±0.03 0.323±0.31 1.425±0.17 0.072±0.04 1.652±0.65 0.350±0.19 0.762±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AA CIL_0004AA_0002 CGP 12:108894272-109068217
CIL_0004A9 CIL_0004A9_0002 CGP 12:109032187-109463336

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043673 BEGAIN (1 of 2) brain-enriched guanylate kinase-associated protein_coding Danio_rerio
ENSDARG00000089545 BEGAIN (2 of 2) brain-enriched guanylate kinase-associated protein_coding Danio_rerio
ENSG00000183092 BEGAIN brain-enriched guanylate kinase-associated protein_coding Homo_sapiens

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