C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ripply transcriptional repressor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183145 RIPPLY3 9606 + 21:37006150-37019659 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329553 RIPPLY3-001 37006563-37019659 protein_coding
  ENST00000485272 RIPPLY3-003 37006150-37019659 processed_transcript
  ENST00000490393 RIPPLY3-002 37006202-37019659 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329553ENST00000485272ENST00000490393
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.830±0.29 0.359±0.00 N/A
ENST00000485272 N/A N/A N/A 0.074±0.00 N/A N/A 0.176±0.00 N/A N/A N/A N/A N/A 0.284±0.00
ENST00000490393 0.078±0.00 0.255±0.00 0.199±0.00 0.245±0.00 0.062±0.00 0.396±0.00 0.157±0.00 0.125±0.00 0.308±0.00 0.953±0.00 0.079±0.06 0.141±0.09 0.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZF CIL_0006ZF_0001 CGP 21:36750888-37019659
CIL_0001CY CIL_0001CY_0002 CGP 21:37006150-37073170

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IEA protein binding
GO:0005634 NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IEA heart development
GO:0008150 ND biological_process
GO:0060037 IEA pharyngeal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036974 ripply3 ripply3 protein_coding Danio_rerio
ENSMUSG00000022941 Ripply3 ripply3 homolog (zebrafish) protein_coding Mus_musculus

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