C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ripply3 homolog (zebrafish)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022941 Ripply3 10090 + 16:94328420-94336935 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023660 Ripply3-001 94328420-94336935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023660
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023660 2.005±0.48 3.068±0.82 1.029±0.00 0.370±0.13 1.325±0.21 0.895±0.32 1.814±0.42 2.712±0.24 0.897±0.22 26.308±4.98 0.608±0.14 0.954±0.43 1.585±0.38 0.060±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZF CIL_0006ZF_0002 CGP 16:94129195-94336935
CIL_0001CY CIL_0001CY_0003 CGP 16:94328420-94371015

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IMP heart development
GO:0060037 IMP pharyngeal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036974 ripply3 ripply3 protein_coding Danio_rerio
ENSG00000183145 RIPPLY3 ripply transcriptional repressor 3 protein_coding Homo_sapiens

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