C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fanconi anemia, complementation group F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183161 FANCF 9606 - 11:22622519-22626787 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327470 FANCF-001 22622519-22626787 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000327470
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000327470 2.564±0.00 0.580±0.00 0.857±0.00 1.346±0.00 1.060±0.39 0.557±0.08 1.784±0.09 1.054±0.00 0.250±0.00 1.894±0.93 0.950±0.05 0.566±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FU CIL_0003FU_0001 CGP 11:22338097-22626787
CIL_00088G CIL_00088G_0001 VISTA 11:22474995-23077197
CIL_0004AS CIL_0004AS_0002 CGP 11:22622519-22813055

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001541 IEA ovarian follicle development
GO:0003674 ND molecular_function
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006281 TAS DNA repair
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0043240 IDA Fanconi anaemia nuclear complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019250 fancf Fanconi anemia, complementation group F protein_coding Danio_rerio
ENSMUSG00000092118 Fancf Fanconi anemia, complementation group F protein_coding Mus_musculus

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