C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fanconi anemia, complementation group F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000092118 Fancf 10090 - 7:51860577-51862267 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000169357 Fancf-201 51860577-51862267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000169357
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169357 5.150±0.00 6.432±2.46 2.607±0.50 5.045±1.26 3.179±0.00 4.013±0.70 4.548±2.48 2.219±0.26 0.444±0.13 8.230±6.27 2.757±2.20 0.873±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FU CIL_0003FU_0002 CGP 7:51621830-51862267
CIL_00088G CIL_00088G_0002 VISTA 7:51668458-52270961
CIL_0004AS CIL_0004AS_0003 CGP 7:51860577-51994975

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001541 IMP ovarian follicle development
GO:0004842 IMP ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007283 IMP spermatogenesis
GO:0016567 IMP protein ubiquitination
GO:0043240 IMP Fanconi anaemia nuclear complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019250 fancf Fanconi anemia, complementation group F protein_coding Danio_rerio
ENSG00000183161 FANCF Fanconi anemia, complementation group F protein_coding Homo_sapiens

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