C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004AS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019250-ENSDARG00000001259 CGP 7955 25:36355972-36430814
GeneTranscriptPositionBiotype
ENSDARG00000001259 (GAS2 (1 of 2))
growth arrest-specific 2 		ENSDART00000034313 (GAS2 (1 of 2)-201) 36366303-36430814 protein_coding
ENSDARG00000019250 (fancf)
Fanconi anemia, complementation group F 		ENSDART00000018107 (fancf-001) 36355972-36357467 protein_coding
ENSDARG00000074076 (psma1)
proteasome (prosome, macropain) subunit, alpha type, 1 		ENSDART00000108575 (psma1-201) 36401901-36406859 protein_coding
ENSDARG00000076141 (CABZ01088346.1)
Anoctamin 		ENSDART00000109158 (CABZ01088346.1-201) 36408315-36414477 protein_coding
ENSDARG00000077459 (RIC3 (2 of 2))
RIC3 acetylcholine receptor chaperone 		ENSDART00000112570 (RIC3 (2 of 2)-201) 36398909-36400096 protein_coding
CIL_0004AS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183161-ENSG00000148935 CGP 9606 11:22622519-22813055
GeneTranscriptPositionBiotype
ENSG00000148935 (GAS2)
growth arrest-specific 2 		ENST00000278187 (GAS2-002) 22668108-22812996 protein_coding
ENST00000454584 (GAS2-001) 22666615-22813055 protein_coding
ENST00000524701 (GAS2-003) 22668108-22813001 nonsense_mediated_decay
ENST00000526665 (GAS2-009) 22755648-22755953 processed_transcript
ENST00000528582 (GAS2-010) 22625642-22749190 protein_coding
ENST00000532398 (GAS2-005) 22674773-22749261 protein_coding
ENST00000533092 (GAS2-008) 22666583-22702630 processed_transcript
ENST00000533363 (GAS2-007) 22667076-22726432 protein_coding
ENST00000534801 (GAS2-006) 22672577-22737760 protein_coding
ENSG00000183161 (FANCF)
Fanconi anemia, complementation group F 		ENST00000327470 (FANCF-001) 22622519-22626787 protein_coding
CIL_0004AS_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000092118-ENSMUSG00000030498 CGP 10090 7:51860577-51994975
GeneTranscriptPositionBiotype
ENSMUSG00000030498 (Gas2)
growth arrest specific 2 		ENSMUST00000051912 (Gas2-001) 51878967-51994453 protein_coding
ENSMUST00000107589 (Gas2-004) 51862427-51965987 protein_coding
ENSMUST00000107591 (Gas2-002) 51879050-51994458 protein_coding
ENSMUST00000129604 (Gas2-003) 51862015-51994975 nonsense_mediated_decay
ENSMUST00000132335 (Gas2-005) 51863904-51864397 retained_intron
ENSMUST00000145049 (Gas2-006) 51880331-51943729 protein_coding
ENSMUST00000145723 (Gas2-008) 51943684-51956434 processed_transcript
ENSMUST00000155925 (Gas2-007) 51926436-51943767 processed_transcript
ENSMUSG00000092118 (Fancf)
Fanconi anemia, complementation group F 		ENSMUST00000169357 (Fancf-201) 51860577-51862267 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AS_0001ENSDARG00000001259ENSDART00000034313ENSDARG00000019250ENSDART00000018107ENSDARG00000074076ENSDART00000108575ENSDARG00000076141ENSDART00000109158ENSDARG00000077459ENSDART00000112570CIL_0004AS_0002ENSG00000148935ENST00000278187ENST00000454584ENST00000524701ENST00000526665ENST00000528582ENST00000532398ENST00000533092ENST00000533363ENST00000534801ENSG00000183161ENST00000327470CIL_0004AS_0003ENSMUSG00000030498ENSMUST00000051912ENSMUST00000107589ENSMUST00000107591ENSMUST00000129604ENSMUST00000132335ENSMUST00000145049ENSMUST00000145723ENSMUST00000155925ENSMUSG00000092118ENSMUST00000169357
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AS_0001ENSDARG00000001259ENSDART00000034313ENSDARG00000019250ENSDART00000018107ENSDARG00000074076ENSDART00000108575ENSDARG00000076141ENSDART00000109158ENSDARG00000077459ENSDART00000112570CIL_0004AS_0002ENSG00000148935ENST00000278187ENST00000454584ENST00000524701ENST00000532398ENST00000533363ENST00000534801ENSG00000183161ENST00000327470CIL_0004AS_0003ENSMUSG00000030498ENSMUST00000051912ENSMUST00000107589ENSMUST00000107591ENSMUST00000129604ENSMUST00000145049ENSMUSG00000092118ENSMUST00000169357
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001259 ENSDART00000034313 N/A N/A N/A 0.237±0.03 N/A N/A 0.112±0.02 0.240±0.00 N/A N/A 0.192±0.00 N/A N/A N/A
ENSDARG00000019250 ENSDART00000018107 N/A N/A N/A 1.000±0.88 N/A N/A 0.083±0.04 1.898±1.90 0.256±0.00 N/A 0.254±0.00 N/A N/A N/A
ENSDARG00000074076 ENSDART00000108575 N/A N/A N/A 22.782±24.65 N/A N/A 46.265±34.63 11.260±0.00 15.497±0.00 N/A 106.898±0.00 N/A N/A N/A
ENSDARG00000076141 ENSDART00000109158 N/A N/A N/A 2.205±0.35 N/A N/A 1.761±0.03 2.172±0.00 0.167±0.00 N/A 25.843±0.00 N/A N/A N/A
ENSDARG00000077459 ENSDART00000112570 N/A N/A N/A 3.260±1.27 N/A N/A N/A 1.094±0.00 N/A N/A 1.102±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148935 ENST00000278187 N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A 1.779±0.00 N/A N/A N/A N/A N/A
ENST00000454584 N/A N/A 0.414±0.00 N/A N/A N/A 1.084±0.46 N/A 1.099±0.00 0.362±0.07 N/A 0.675±0.00 N/A N/A
ENST00000524701 N/A N/A N/A 0.438±0.00 N/A 0.272±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532398 N/A N/A 1.187±0.00 1.813±0.00 N/A N/A N/A N/A 1.239±0.00 N/A 3.214±0.00 N/A N/A N/A
ENST00000533092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533363 N/A N/A N/A 3.689±0.00 N/A N/A 2.366±0.00 11.064±0.00 2.516±0.00 N/A N/A N/A N/A N/A
ENST00000534801 N/A N/A N/A 3.933±0.00 N/A N/A N/A N/A N/A N/A 3.528±0.00 2.079±0.00 N/A N/A
ENSG00000183161 ENST00000327470 N/A 2.564±0.00 0.580±0.00 0.857±0.00 1.346±0.00 1.060±0.39 0.557±0.08 1.784±0.09 1.054±0.00 N/A 0.250±0.00 1.894±0.93 0.950±0.05 0.566±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030498 ENSMUST00000051912 N/A N/A 0.416±0.08 1.171±0.00 0.798±0.00 N/A 0.452±0.06 62.949±4.19 5.293±4.34 N/A 0.508±0.11 3.397±1.97 0.538±0.33 0.195±0.00
ENSMUST00000107589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.146±0.00
ENSMUST00000107591 N/A N/A N/A 1.361±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.08 N/A
ENSMUST00000129604 1.658±0.65 5.868±1.76 0.549±0.12 2.484±0.51 0.849±0.37 1.062±0.14 0.239±0.00 6.382±0.70 2.320±1.40 0.863±0.33 0.155±0.04 3.420±2.08 0.417±0.33 0.501±0.07
ENSMUST00000132335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145049 N/A N/A N/A N/A N/A N/A 0.817±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000092118 ENSMUST00000169357 5.150±0.00 6.432±2.46 2.607±0.50 5.045±1.26 3.179±0.00 4.013±0.70 N/A N/A 4.548±2.48 2.219±0.26 0.444±0.13 8.230±6.27 2.757±2.20 0.873±0.03

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