C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: E1A binding protein p400
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389562 EP400-001 ENSG00000183495 9606 + 12:131960585-132081102 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartENST00000389562
Transcript ID Colon Heart
ENST00000389562 0.298±0.00 0.101±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000812 IDA Swr1 complex
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0016607 ISS nuclear speck
GO:0035267 IDA NuA4 histone acetyltransferase complex
GO:0043967 IDA histone H4 acetylation
GO:0043968 IDA histone H2A acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041558 Ep400-002 protein_coding Mus_musculus 0 3762
ENSMUST00000112436 Ep400-001 protein_coding Mus_musculus 0 3059
ENSMUST00000112435 Ep400-201 protein_coding Mus_musculus 0 2567
ENSMUST00000146458 Ep400-004 protein_coding Mus_musculus 0 1576
ENSMUST00000112433 Ep400-003 protein_coding Mus_musculus 0 1201
ENSMUST00000125325 Ep400-006 protein_coding Mus_musculus 0 856
ENSMUST00000141986 Ep400-007 retained_intron Mus_musculus 0 446
ENSMUST00000144581 Ep400-010 processed_transcript Mus_musculus 0 250

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