C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E1A binding protein p400
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389561 EP400-201 ENSG00000183495 9606 + 12:131949920-132080466 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000389561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000389561 4.813±0.00 3.368±0.00 0.550±0.00 1.242±0.62 2.840±0.24 1.324±0.58 1.975±0.00 1.905±0.00 0.859±0.00 1.176±0.68 4.364±0.00 4.348±2.35 2.242±0.95 4.927±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000812 IDA Swr1 complex
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0016607 ISS nuclear speck
GO:0035267 IDA NuA4 histone acetyltransferase complex
GO:0043967 IDA histone H4 acetylation
GO:0043968 IDA histone H2A acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041558 Ep400-002 protein_coding Mus_musculus 0 3762
ENSMUST00000112436 Ep400-001 protein_coding Mus_musculus 0 3059
ENSMUST00000112435 Ep400-201 protein_coding Mus_musculus 0 2567
ENSMUST00000146458 Ep400-004 protein_coding Mus_musculus 0 1576
ENSMUST00000112433 Ep400-003 protein_coding Mus_musculus 0 1201
ENSMUST00000125325 Ep400-006 protein_coding Mus_musculus 0 856
ENSMUST00000141986 Ep400-007 retained_intron Mus_musculus 0 446
ENSMUST00000144581 Ep400-010 processed_transcript Mus_musculus 0 250

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