C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: uridine phosphorylase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183696 UPP1 9606 + 7:48088628-48108733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331803 UPP1-001 48088644-48108733 protein_coding
  ENST00000395560 UPP1-004 48089265-48108419 nonsense_mediated_decay
  ENST00000395564 UPP1-003 48089237-48108419 protein_coding
  ENST00000416681 UPP1-009 48088628-48103407 protein_coding
  ENST00000417464 UPP1-006 48089376-48108419 nonsense_mediated_decay
  ENST00000421046 UPP1-007 48089227-48103991 nonsense_mediated_decay
  ENST00000432131 UPP1-002 48088661-48099714 protein_coding
  ENST00000436673 UPP1-011 48089265-48103413 protein_coding
  ENST00000444999 UPP1-012 48089282-48107082 nonsense_mediated_decay
  ENST00000457596 UPP1-010 48088727-48108302 nonsense_mediated_decay
  ENST00000482015 UPP1-005 48089344-48108419 processed_transcript
  ENST00000495446 UPP1-008 48104646-48108415 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331803ENST00000395560ENST00000395564ENST00000417464ENST00000421046ENST00000444999ENST00000457596ENST00000482015ENST00000495446
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331803 N/A N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A N/A N/A N/A N/A
ENST00000395560 9.663±0.00 N/A N/A 7.632±0.00 N/A 12.226±0.00 N/A N/A N/A 26.683±0.00 N/A 5.249±0.22 13.945±7.96 2.287±0.00
ENST00000395564 4.695±0.00 10.548±0.00 N/A N/A 2.024±0.00 3.436±2.00 N/A 9.230±0.00 3.809±2.97 10.516±0.00 N/A 2.396±0.68 3.767±1.56 1.511±0.00
ENST00000417464 N/A N/A N/A N/A 8.590±0.00 5.480±0.00 N/A 13.841±0.00 4.577±0.00 N/A 0.483±0.00 N/A 9.594±0.52 4.924±0.00
ENST00000421046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.461±0.07 N/A N/A N/A
ENST00000444999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.785±0.00 N/A
ENST00000457596 N/A N/A N/A N/A N/A N/A 3.353±0.00 N/A N/A N/A 0.609±0.00 9.716±0.00 9.586±0.00 2.720±0.00
ENST00000482015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.271±0.99 N/A N/A
ENST00000495446 3.319±0.00 5.582±0.00 0.499±0.00 2.617±0.32 1.370±0.27 0.734±0.00 0.831±0.25 1.487±0.75 0.751±0.14 2.844±0.76 0.218±0.11 1.623±1.13 0.842±0.06 0.915±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S9 CIL_0000S9_0001 CGP 7:48035511-48108733
CIL_0000S4 CIL_0000S4_0001 CGP 7:48088628-48647496

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004850 IEA uridine phosphorylase activity
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0006220 IEA pyrimidine nucleotide metabolic process
GO:0009116 IEA nucleoside metabolic process
GO:0009166 IEA nucleotide catabolic process
GO:0016763 IEA transferase activity, transferring pentosyl groups
GO:0042149 IEA cellular response to glucose starvation
GO:0043097 TAS pyrimidine nucleoside salvage
GO:0044206 IEA UMP salvage
GO:0044281 TAS small molecule metabolic process
GO:0046108 IEA uridine metabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040869 upp1 uridine phosphorylase 1 protein_coding Danio_rerio
ENSMUSG00000020407 Upp1 uridine phosphorylase 1 protein_coding Mus_musculus

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