C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: uridine phosphorylase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020407 Upp1 10090 + 11:9118103-9136170 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020677 Upp1-001 9118103-9136164 protein_coding
  ENSMUST00000101525 Upp1-002 9118107-9136170 protein_coding
  ENSMUST00000130522 Upp1-003 9118548-9133322 protein_coding
  ENSMUST00000146696 Upp1-004 9133015-9136082 retained_intron
  ENSMUST00000164791 Upp1-201 9118507-9136167 protein_coding
  ENSMUST00000166455 Upp1-008 9125683-9134749 protein_coding
  ENSMUST00000168121 Upp1-006 9118627-9119673 retained_intron
  ENSMUST00000170444 Upp1-005 9118245-9134729 protein_coding
  ENSMUST00000172452 Upp1-007 9118787-9133251 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020677ENSMUST00000101525ENSMUST00000130522ENSMUST00000146696ENSMUST00000164791ENSMUST00000166455ENSMUST00000170444ENSMUST00000172452
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020677 0.747±0.12 1.370±0.58 0.321±0.06 0.117±0.00 0.888±0.07 N/A 0.468±0.15 1.947±0.00 0.245±0.07 2.549±0.24 0.098±0.00 0.845±0.31 N/A 0.255±0.00
ENSMUST00000101525 2.660±0.73 2.709±0.97 0.520±0.05 0.319±0.00 2.551±0.79 17.799±3.80 1.269±0.63 3.054±1.06 0.625±0.24 6.537±1.32 0.242±0.14 2.549±1.25 39.544±27.18 0.330±0.15
ENSMUST00000130522 1.904±0.00 N/A 1.150±0.00 0.282±0.11 N/A N/A N/A N/A 0.567±0.20 N/A 0.082±0.00 1.360±0.00 23.504±8.73 N/A
ENSMUST00000146696 N/A N/A N/A N/A 1.194±0.15 N/A N/A N/A 0.335±0.00 N/A 0.074±0.02 1.302±0.00 N/A N/A
ENSMUST00000164791 1.432±0.47 0.439±0.00 0.569±0.37 0.355±0.30 1.408±0.54 19.268±3.18 1.293±0.46 4.799±1.07 0.417±0.24 3.880±1.14 N/A 1.851±1.25 29.095±12.38 N/A
ENSMUST00000166455 3.694±0.00 N/A N/A N/A 5.660±0.00 N/A 1.248±0.00 N/A 0.742±0.00 N/A 0.156±0.00 3.489±0.00 N/A 0.313±0.12
ENSMUST00000170444 N/A N/A N/A 0.601±0.00 N/A N/A N/A N/A 0.606±0.06 N/A N/A N/A N/A 0.213±0.00
ENSMUST00000172452 N/A N/A N/A 0.255±0.00 3.308±0.00 N/A N/A N/A N/A N/A 0.180±0.07 3.296±0.46 51.262±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S9 CIL_0000S9_0002 CGP 11:9048594-9136170
CIL_0000S4 CIL_0000S4_0002 CGP 11:9118103-9684259

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004850 IDA uridine phosphorylase activity
GO:0005737 IEA cytoplasm
GO:0006220 IMP pyrimidine nucleotide metabolic process
GO:0009166 IEA nucleotide catabolic process
GO:0042149 IEA cellular response to glucose starvation
GO:0044206 IEA UMP salvage
GO:0046108 IMP uridine metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040869 upp1 uridine phosphorylase 1 protein_coding Danio_rerio
ENSG00000183696 UPP1 uridine phosphorylase 1 protein_coding Homo_sapiens

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