C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uridine phosphorylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395560 UPP1-004 ENSG00000183696 9606 + 7:48089265-48108419 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonLungOvaryPlacentaTestisENST00000395560
Transcript ID Adipose Brain Colon Lung Ovary Placenta Testis
ENST00000395560 9.663±0.00 7.632±0.00 12.226±0.00 26.683±0.00 5.249±0.22 13.945±7.96 2.287±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S9 CIL_0000S9_0001 CGP 7:48035511-48108733
CIL_0000S4 CIL_0000S4_0001 CGP 7:48088628-48647496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004850 IEA uridine phosphorylase activity
GO:0005829 TAS cytosol
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0009166 IEA nucleotide catabolic process
GO:0043097 TAS pyrimidine nucleoside salvage
GO:0044206 IEA UMP salvage
GO:0044281 TAS small molecule metabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164791 Upp1-201 protein_coding Mus_musculus 0 420
ENSMUST00000101525 Upp1-002 protein_coding Mus_musculus 0 420
ENSMUST00000020677 Upp1-001 protein_coding Mus_musculus 0 420
ENSMUST00000146696 Upp1-004 retained_intron Mus_musculus 0 414

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