C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438754 SEPT5-002 ENSG00000184702 9606 + 22:19718458-19723319 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartMuscleOvaryPlacentaTestisENST00000438754
Transcript ID Adrenal Brain Colon Heart Muscle Ovary Placenta Testis
ENST00000438754 7.742±0.00 10.426±0.00 2.025±0.00 19.078±17.85 1.346±0.00 4.528±0.00 4.558±1.02 4.546±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 TAS cytokinesis
GO:0003924 TAS:IEA GTPase activity
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005886 IDA plasma membrane
GO:0006184 TAS GTP catabolic process
GO:0007049 IEA cell cycle
GO:0008021 IDA synaptic vesicle
GO:0016080 TAS synaptic vesicle targeting
GO:0017157 IMP regulation of exocytosis
GO:0031105 IEA septin complex
GO:2000300 TAS regulation of synaptic vesicle exocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096987 Sept5-201 protein_coding Mus_musculus 0 1277
ENSMUST00000167388 Gp1bb-202 protein_coding Mus_musculus 1e-30 139

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