C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455843 SEPT5-003 ENSG00000184702 9606 + 22:19717220-19724216 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleENST00000455843
Transcript ID Breast Liver Muscle
ENST00000455843 1.230±0.00 0.122±0.00 0.132±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0007049 IEA cell cycle
GO:0031105 IEA septin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096987 Sept5-201 protein_coding Mus_musculus 0 1332
ENSMUST00000167388 Gp1bb-202 protein_coding Mus_musculus 0 612
ENSMUST00000051160 Gp1bb-201 protein_coding Mus_musculus 0 435
ENSDART00000075796 CABZ01029366.1-201 protein_coding Danio_rerio 0 272

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