C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein arginine methyltransferase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185238 PRMT3 9606 + 11:20387530-20509294 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330796 PRMT3-002 20387558-20509294 nonsense_mediated_decay
  ENST00000331079 PRMT3-001 20387530-20509253 protein_coding
  ENST00000437750 PRMT3-003 20387716-20508708 protein_coding
  ENST00000525188 PRMT3-006 20387640-20397662 nonsense_mediated_decay
  ENST00000526583 PRMT3-005 20387747-20392251 nonsense_mediated_decay
  ENST00000529592 PRMT3-004 20405446-20509282 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330796ENST00000331079ENST00000437750ENST00000529592
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330796 N/A N/A N/A N/A N/A N/A N/A N/A 0.512±0.00 N/A 0.564±0.24 1.425±0.44 0.300±0.00 0.910±0.00
ENST00000331079 1.183±0.00 1.252±0.00 1.139±0.00 2.854±0.17 1.909±0.00 1.069±0.16 1.442±1.05 1.615±0.84 1.212±0.47 0.785±0.00 1.862±0.00 3.505±1.42 1.630±0.43 1.609±0.25
ENST00000437750 0.922±0.00 1.773±0.00 0.342±0.00 1.260±0.00 0.473±0.00 1.061±0.24 1.286±0.00 0.639±0.17 0.557±0.00 0.998±0.00 0.985±0.47 4.175±2.96 N/A 2.652±0.00
ENST00000529592 N/A N/A 0.187±0.00 0.519±0.00 0.812±0.00 1.277±0.00 0.364±0.00 0.340±0.08 1.128±0.00 0.736±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AQ CIL_0004AQ_0002 CGP 11:20363685-20509294
CIL_0004AR CIL_0004AR_0002 CGP 11:20387530-20659285

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 NAS:IEA cytoplasm
GO:0005829 IBA cytosol
GO:0005840 IEA ribosome
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0006479 IEA protein methylation
GO:0008152 IEA metabolic process
GO:0008168 IDA:IEA methyltransferase activity
GO:0008276 IEA protein methyltransferase activity
GO:0008469 IBA histone-arginine N-methyltransferase activity
GO:0016274 NAS protein-arginine N-methyltransferase activity
GO:0018216 IEA peptidyl-arginine methylation
GO:0019919 IBA peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0031397 IDA negative regulation of protein ubiquitination
GO:0034969 IBA histone arginine methylation
GO:0035242 IBA protein-arginine omega-N asymmetric methyltransferase activity
GO:0046872 IEA metal ion binding
GO:0072341 IEA modified amino acid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019791 prmt3 protein arginine methyltransferase 3 protein_coding Danio_rerio
ENSMUSG00000030505 Prmt3 protein arginine N-methyltransferase 3 protein_coding Mus_musculus

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