C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein arginine methyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331079 PRMT3-001 ENSG00000185238 9606 + 11:20387530-20509253 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331079
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331079 1.183±0.00 1.252±0.00 1.139±0.00 2.854±0.17 1.909±0.00 1.069±0.16 1.442±1.05 1.615±0.84 1.212±0.47 0.785±0.00 1.862±0.00 3.505±1.42 1.630±0.43 1.609±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AQ CIL_0004AQ_0002 CGP 11:20363685-20509294
CIL_0004AR CIL_0004AR_0002 CGP 11:20387530-20659285

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 NAS:IEA cytoplasm
GO:0005829 IBA cytosol
GO:0005840 IEA ribosome
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0006479 IEA protein methylation
GO:0008152 IEA metabolic process
GO:0008168 IDA:IEA methyltransferase activity
GO:0008276 IEA protein methyltransferase activity
GO:0008469 IBA histone-arginine N-methyltransferase activity
GO:0016274 NAS protein-arginine N-methyltransferase activity
GO:0018216 IEA peptidyl-arginine methylation
GO:0019919 IBA peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0031397 IDA negative regulation of protein ubiquitination
GO:0034969 IBA histone arginine methylation
GO:0035242 IBA protein-arginine omega-N asymmetric methyltransferase activity
GO:0046872 IEA metal ion binding
GO:0072341 IEA modified amino acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032715 Prmt3-001 protein_coding Mus_musculus 0 1784
ENSMUST00000147401 Prmt3-005 nonsense_mediated_decay Mus_musculus 0 1195
ENSMUST00000146052 Prmt3-008 protein_coding Mus_musculus 0 555
ENSMUST00000145666 Prmt3-007 processed_transcript Mus_musculus 0 433
ENSMUST00000140656 Prmt3-002 protein_coding Mus_musculus 0 377
ENSMUST00000152127 Prmt3-006 processed_transcript Mus_musculus 0 206

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