C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: threonyl-tRNA synthetase-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185418 TARSL2 9606 - 15:101653598-101724604 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335968 TARSL2-001 101653598-101724604 protein_coding
  ENST00000539112 TARSL2-003 101654394-101724410 nonsense_mediated_decay
  ENST00000557811 TARSL2-006 101695760-101701165 processed_transcript
  ENST00000558533 TARSL2-004 101654213-101708828 nonsense_mediated_decay
  ENST00000559492 TARSL2-005 101654469-101664442 processed_transcript
  ENST00000560150 TARSL2-007 101714678-101721174 retained_intron
  ENST00000615656 TARSL2-201 101655980-101724442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335968ENST00000539112ENST00000558533ENST00000615656
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335968 0.718±0.00 N/A N/A 2.893±0.72 1.074±0.50 0.763±0.00 1.664±0.79 0.600±0.00 0.591±0.00 N/A 4.938±3.57 1.881±1.07 0.401±0.15 0.769±0.00
ENST00000539112 2.095±0.00 1.263±0.00 N/A 4.045±0.00 1.222±0.00 N/A N/A N/A N/A 0.731±0.00 3.399±0.00 1.400±0.00 0.966±0.00 2.290±0.81
ENST00000558533 1.756±0.00 2.446±0.00 2.095±0.00 3.915±0.08 2.069±0.43 1.881±0.41 2.125±0.61 2.309±0.43 1.069±0.01 0.945±0.46 7.037±2.85 2.077±0.70 0.344±0.15 3.461±0.13
ENST00000615656 N/A 1.155±0.00 2.210±0.00 4.276±0.03 N/A 1.854±0.94 2.040±0.94 1.238±0.14 2.694±0.00 0.755±0.00 5.041±3.96 1.068±0.00 0.247±0.05 2.368±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004829 IEA threonine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006418 IEA tRNA aminoacylation for protein translation
GO:0006435 IEA threonyl-tRNA aminoacylation
GO:0008150 ND biological_process
GO:0016876 IEA ligase activity, forming aminoacyl-tRNA and related compounds
GO:0043039 IEA tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092774 tarsl2 threonyl-tRNA synthetase-like 2 protein_coding Danio_rerio
ENSMUSG00000030515 Tarsl2 threonyl-tRNA synthetase-like 2 protein_coding Mus_musculus

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