C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonyl-tRNA synthetase-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539112 TARSL2-003 ENSG00000185418 9606 - 15:101654394-101724410 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLungMuscleOvaryPlacentaTestisENST00000539112
Transcript ID Adipose Adrenal Brain Breast Lung Muscle Ovary Placenta Testis
ENST00000539112 2.095±0.00 1.263±0.00 4.045±0.00 1.222±0.00 0.731±0.00 3.399±0.00 1.400±0.00 0.966±0.00 2.290±0.81

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004829 IEA threonine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006418 IEA tRNA aminoacylation for protein translation
GO:0006435 IEA threonyl-tRNA aminoacylation
GO:0016876 IEA ligase activity, forming aminoacyl-tRNA and related compounds
GO:0043039 IEA tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032728 Tarsl2-001 protein_coding Mus_musculus 0 2263
ENSMUST00000126941 Tarsl2-002 retained_intron Mus_musculus 0 1711
ENSMUST00000127354 Tarsl2-003 processed_transcript Mus_musculus 0 604
ENSMUST00000065574 Tm2d3-001 protein_coding Mus_musculus 2e-23 115
ENSDART00000109202 TARSL2 (1 of 2)-202 protein_coding Danio_rerio 3e-17 95
ENSDART00000109645 TARSL2 (1 of 2)-201 protein_coding Danio_rerio 3e-17 95

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