C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonyl-tRNA synthetase-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335968 TARSL2-001 ENSG00000185418 9606 - 15:101653598-101724604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000335968
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000335968 0.718±0.00 2.893±0.72 1.074±0.50 0.763±0.00 1.664±0.79 0.600±0.00 0.591±0.00 4.938±3.57 1.881±1.07 0.401±0.15 0.769±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004829 IEA threonine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006418 IEA tRNA aminoacylation for protein translation
GO:0006435 IEA threonyl-tRNA aminoacylation
GO:0008150 ND biological_process
GO:0016876 IEA ligase activity, forming aminoacyl-tRNA and related compounds
GO:0043039 IEA tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032728 Tarsl2-001 protein_coding Mus_musculus 0 2392
ENSMUST00000126941 Tarsl2-002 retained_intron Mus_musculus 0 1711
ENSMUST00000127354 Tarsl2-003 processed_transcript Mus_musculus 0 604
ENSMUST00000065574 Tm2d3-001 protein_coding Mus_musculus 1e-22 113
ENSDART00000109202 TARSL2 (1 of 2)-202 protein_coding Danio_rerio 4e-17 95
ENSDART00000109645 TARSL2 (1 of 2)-201 protein_coding Danio_rerio 4e-17 95

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