C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonyl-tRNA synthetase-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558533 TARSL2-004 ENSG00000185418 9606 - 15:101654213-101708828 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000558533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000558533 1.756±0.00 2.446±0.00 2.095±0.00 3.915±0.08 2.069±0.43 1.881±0.41 2.125±0.61 2.309±0.43 1.069±0.01 0.945±0.46 7.037±2.85 2.077±0.70 0.344±0.15 3.461±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0016876 IEA ligase activity, forming aminoacyl-tRNA and related compounds
GO:0043039 IEA tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032728 Tarsl2-001 protein_coding Mus_musculus 0 898
ENSMUST00000127354 Tarsl2-003 processed_transcript Mus_musculus 0 732
ENSMUST00000126941 Tarsl2-002 retained_intron Mus_musculus 0 547
ENSMUST00000065574 Tm2d3-001 protein_coding Mus_musculus 6e-23 113
ENSDART00000109202 TARSL2 (1 of 2)-202 protein_coding Danio_rerio 2e-17 95
ENSDART00000109645 TARSL2 (1 of 2)-201 protein_coding Danio_rerio 2e-17 95

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