C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SHC (Src homology 2 domain containing) family, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185634 SHC4 9606 - 15:48823735-48963444 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332408 SHC4-001 48823735-48963444 protein_coding
  ENST00000396535 SHC4-003 48825167-48877489 protein_coding
  ENST00000537958 SHC4-002 48825779-48878054 protein_coding
  ENST00000557797 SHC4-005 48834846-48877629 nonsense_mediated_decay
  ENST00000558220 SHC4-004 48855953-48878050 protein_coding
  ENST00000559289 SHC4-006 48872013-48877281 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000332408
Transcript ID Testis
ENST00000332408 4.368±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GC CIL_0008GC_0001 VISTA 15:48330070-48933845
CIL_0004NF CIL_0004NF_0001 CGP 15:48712928-48963444
CIL_0004NA CIL_0004NA_0001 CGP 15:48823735-48963444

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0006915 IEA apoptotic process
GO:0008284 IEA positive regulation of cell proliferation
GO:0010468 IEA regulation of gene expression
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0030971 IEA receptor tyrosine kinase binding
GO:0035556 IEA intracellular signal transduction
GO:0045211 IEA postsynaptic membrane
GO:0048863 IEA stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000035109 Shc4 SHC (Src homology 2 domain containing) family, member 4 protein_coding Mus_musculus

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