C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008GC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm670 VISTA 9606 15:48330070-48933845
GeneTranscriptPositionBiotype
ENSG00000103995 (CEP152)
centrosomal protein 152kDa 		ENST00000325747 (CEP152-003) 48740506-48811030 protein_coding
ENST00000380950 (CEP152-001) 48737935-48811141 protein_coding
ENST00000399334 (CEP152-004) 48738151-48810987 protein_coding
ENST00000558337 (CEP152-008) 48783983-48789322 processed_transcript
ENST00000558591 (CEP152-007) 48797717-48810594 protein_coding
ENST00000559398 (CEP152-009) 48768973-48773531 processed_transcript
ENST00000559444 (CEP152-006) 48797671-48811079 retained_intron
ENST00000559630 (CEP152-005) 48805520-48811076 retained_intron
ENST00000560322 (CEP152-002) 48772515-48811146 non_stop_decay
ENST00000561245 (CEP152-010) 48712928-48742014 nonsense_mediated_decay
ENSG00000128951 (DUT)
deoxyuridine triphosphatase 		ENST00000331200 (DUT-001) 48331423-48343373 protein_coding
ENST00000455976 (DUT-003) 48332103-48343369 protein_coding
ENST00000558367 (DUT-010) 48332406-48342033 protein_coding
ENST00000558472 (DUT-009) 48331456-48342052 protein_coding
ENST00000558813 (DUT-006) 48331405-48342293 protein_coding
ENST00000558978 (DUT-002) 48331473-48342395 nonsense_mediated_decay
ENST00000559416 (DUT-008) 48331095-48342137 protein_coding
ENST00000559540 (DUT-004) 48332210-48342395 protein_coding
ENST00000559852 (DUT-011) 48341136-48342062 retained_intron
ENST00000559935 (DUT-007) 48331011-48341495 protein_coding
ENST00000561350 (DUT-012) 48334445-48340236 processed_transcript
ENSG00000166147 (FBN1)
fibrillin 1 		ENST00000316623 (FBN1-001) 48408306-48645849 protein_coding
ENST00000537463 (FBN1-003) 48430764-48645709 nonsense_mediated_decay
ENST00000558230 (FBN1-006) 48642847-48644832 processed_transcript
ENST00000559133 (FBN1-004) 48410074-48467991 nonsense_mediated_decay
ENST00000560355 (FBN1-002) 48640989-48645721 protein_coding
ENST00000560720 (FBN1-008) 48427944-48432891 retained_intron
ENST00000560820 (FBN1-007) 48437622-48445412 retained_intron
ENST00000561429 (FBN1-009) 48411201-48416716 processed_transcript
ENSG00000185634 (SHC4)
SHC (Src homology 2 domain containing) family, member 4 		ENST00000332408 (SHC4-001) 48823735-48963444 protein_coding
ENST00000396535 (SHC4-003) 48825167-48877489 protein_coding
ENST00000537958 (SHC4-002) 48825779-48878054 protein_coding
ENST00000557797 (SHC4-005) 48834846-48877629 nonsense_mediated_decay
ENST00000558220 (SHC4-004) 48855953-48878050 protein_coding
ENST00000559289 (SHC4-006) 48872013-48877281 retained_intron
ENSG00000255302 (EID1)
EP300 interacting inhibitor of differentiation 1 		ENST00000530028 (EID1-001) 48877886-48880183 protein_coding
ENST00000558295 (EID1-004) 48878136-48879459 processed_transcript
ENST00000560490 (EID1-003) 48878136-48878785 protein_coding
ENSG00000259216 (RP11-227D13.2)
 ENST00000559987 (RP11-227D13.2-001) 48725338-48725827 processed_pseudogene
ENSG00000259469 (RP11-227D13.4)
 ENST00000559165 (RP11-227D13.4-001) 48729080-48729844 lincRNA
ENSG00000259670 (RP11-485O10.2)
 ENST00000558304 (RP11-485O10.2-001) 48783190-48784121 antisense
ENSG00000259705 (RP11-227D13.1)
 ENST00000558061 (RP11-227D13.1-001) 48645951-48652016 lincRNA
ENSG00000273925 (RP11-227D13.5)
 ENST00000616350 (RP11-227D13.5-001) 48662531-48663056 lincRNA
ENSG00000274654 (CTD-3247H4.2)
 ENST00000614738 (CTD-3247H4.2-001) 48528980-48529728 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0008GC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm670 VISTA 10090 2:125191395-125793910
GeneTranscriptPositionBiotype
ENSMUSG00000027202 (Slc12a1)
solute carrier family 12, member 1 		ENSMUST00000028630 (Slc12a1-002) 125152600-125230002 protein_coding
ENSMUST00000110494 (Slc12a1-001) 125152505-125230002 protein_coding
ENSMUST00000110495 (Slc12a1-003) 125152600-125229999 protein_coding
ENSMUST00000147095 (Slc12a1-004) 125152580-125167145 retained_intron
ENSMUSG00000027203 (Dut)
deoxyuridine triphosphatase 		ENSMUST00000051605 (Dut-002) 125247482-125258608 protein_coding
ENSMUST00000082122 (Dut-001) 125247190-125257748 protein_coding
ENSMUST00000133211 (Dut-003) 125247900-125249028 processed_transcript
ENSMUSG00000027204 (Fbn1)
fibrillin 1 		ENSMUST00000028633 (Fbn1-001) 125300594-125506385 protein_coding
ENSMUST00000103234 (Fbn1-003) 125300627-125507993 protein_coding
ENSMUST00000148272 (Fbn1-002) 125389756-125506072 retained_intron
ENSMUSG00000035093 (Secisbp2l)
SECIS binding protein 2-like 		ENSMUST00000053699 (Secisbp2l-001) 125736986-125782870 protein_coding
ENSMUST00000136450 (Secisbp2l-003) 125750378-125752264 retained_intron
ENSMUST00000139944 (Secisbp2l-002) 125744775-125760314 protein_coding
ENSMUSG00000035109 (Shc4)
SHC (Src homology 2 domain containing) family, member 4 		ENSMUST00000042246 (Shc4-001) 125627447-125723387 protein_coding
ENSMUST00000110477 (Shc4-003) 125629065-125673502 protein_coding
ENSMUST00000110480 (Shc4-002) 125627447-125673632 protein_coding
ENSMUST00000157002 (Shc4-004) 125691910-125724148 retained_intron
ENSMUSG00000053615 (Gm9913)
predicted gene 9913 		ENSMUST00000066157 (Gm9913-201) 125505089-125507881 protein_coding
ENSMUSG00000068394 (Cep152)
centrosomal protein 152 		ENSMUST00000089776 (Cep152-001) 125563088-125625113 protein_coding
ENSMUSG00000085797 (A530010F05Rik)
RIKEN cDNA A530010F05 gene 		ENSMUST00000146845 (A530010F05Rik-001) 125274564-125277172 antisense
ENSMUSG00000086416 (Gm14002)
predicted gene 14002 		ENSMUST00000123574 (Gm14002-001) 125207529-125217512 antisense
ENSMUSG00000087682 (Gm14003)
predicted gene 14003 		ENSMUST00000130919 (Gm14003-001) 125282688-125283978 lincRNA
ENSMUSG00000091337 (Eid1)
EP300 interacting inhibitor of differentiation 1 		ENSMUST00000164756 (Eid1-001) 125673095-125674785 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103995 ENST00000325747 0.054±0.00 0.270±0.00 N/A 0.107±0.00 N/A 0.431±0.00 0.068±0.02 N/A 0.314±0.00 1.028±0.00 N/A 0.625±0.14 0.279±0.22 1.197±0.21
ENST00000380950 0.218±0.00 N/A N/A N/A 0.083±0.00 0.361±0.15 0.029±0.00 0.198±0.08 0.228±0.20 0.053±0.00 0.031±0.00 0.198±0.06 0.080±0.01 1.480±0.00
ENST00000399334 0.073±0.00 N/A N/A 0.075±0.00 0.125±0.00 N/A N/A N/A N/A N/A 0.007±0.00 N/A 0.054±0.00 2.329±0.00
ENST00000558337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559444 N/A N/A 3.449±0.00 N/A 2.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559630 N/A N/A N/A 2.629±0.00 N/A N/A 5.756±0.00 N/A 9.299±0.00 15.043±0.00 N/A 22.517±0.00 N/A N/A
ENST00000560322 N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A N/A 0.061±0.00 0.914±0.00 N/A N/A
ENST00000561245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.430±0.00 N/A N/A N/A
ENSG00000128951 ENST00000331200 N/A N/A N/A N/A 1.896±0.00 N/A 1.300±0.69 1.571±0.77 0.907±0.41 1.644±0.49 0.411±0.00 3.542±1.02 2.852±1.46 N/A
ENST00000455976 N/A 2.686±0.00 0.541±0.00 2.465±0.79 1.352±0.29 2.435±0.00 N/A N/A 0.444±0.00 0.847±0.00 0.172±0.00 1.971±0.00 1.168±0.00 2.862±0.00
ENST00000558367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558472 10.583±0.00 N/A N/A N/A N/A N/A 8.546±0.00 N/A 5.324±0.00 13.757±0.00 1.817±0.83 98.512±80.14 58.548±60.45 134.384±0.00
ENST00000558813 8.903±0.00 11.247±0.00 N/A 7.943±0.00 9.730±0.00 9.099±0.00 N/A 7.018±0.00 N/A 6.683±0.00 1.984±0.00 27.045±1.18 18.369±4.35 15.435±0.00
ENST00000558978 9.626±0.00 10.151±0.00 2.558±0.00 6.729±0.00 11.003±0.00 11.070±0.00 5.996±0.00 9.683±0.00 2.395±0.00 4.504±0.00 2.138±0.00 N/A 2.836±0.00 9.007±0.00
ENST00000559416 N/A N/A 5.195±0.00 9.900±1.37 11.335±0.00 19.685±0.00 12.458±5.98 5.463±0.00 9.410±5.52 12.463±4.07 2.942±1.96 18.225±0.00 N/A 10.012±0.00
ENST00000559540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166147 ENST00000316623 4.087±0.00 2.604±0.00 N/A 0.348±0.06 10.446±2.84 5.111±0.81 1.985±0.00 1.726±0.22 13.940±13.56 3.194±0.00 1.247±0.00 5.079±2.31 27.678±17.66 8.656±0.00
ENST00000537463 N/A N/A N/A N/A N/A N/A N/A N/A 12.443±0.00 N/A N/A N/A N/A N/A
ENST00000558230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559133 19.095±0.00 7.760±0.00 N/A 1.139±0.55 26.361±15.25 13.936±7.85 7.966±0.00 5.887±0.00 1.396±0.00 11.678±0.00 2.730±0.82 12.099±5.28 108.017±76.31 17.547±8.67
ENST00000560355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185634 ENST00000332408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.368±0.00
ENST00000396535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255302 ENST00000530028 10.250±0.00 N/A 14.979±0.00 68.411±0.00 21.106±0.00 16.955±5.38 19.349±4.48 13.667±6.86 25.777±22.57 17.844±9.56 7.669±3.40 29.512±16.24 18.942±3.84 14.159±7.16
ENST00000558295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560490 72.222±0.00 104.809±0.00 N/A 205.687±0.00 81.981±0.00 84.606±0.00 N/A N/A N/A N/A N/A 165.542±38.17 219.106±0.00 123.256±0.00
ENSG00000259216 ENST00000559987 N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A 0.144±0.00 0.023±0.00 0.134±0.00 1.193±0.00 N/A N/A
ENSG00000259469 ENST00000559165 0.217±0.00 0.255±0.00 N/A 0.090±0.00 0.588±0.00 0.126±0.00 N/A 0.157±0.00 N/A 0.183±0.00 N/A 0.054±0.02 N/A 0.281±0.13
ENSG00000259670 ENST00000558304 N/A N/A N/A N/A N/A N/A N/A N/A 0.484±0.00 N/A N/A N/A N/A N/A
ENSG00000259705 ENST00000558061 0.102±0.00 0.146±0.00 0.065±0.00 0.158±0.00 0.022±0.00 0.060±0.00 0.052±0.05 0.043±0.00 0.074±0.06 0.244±0.00 N/A 0.151±0.09 0.403±0.14 0.165±0.02
ENSG00000273925 ENST00000616350 0.111±0.00 0.065±0.00 N/A N/A N/A N/A N/A 0.231±0.00 N/A N/A N/A 0.066±0.00 0.088±0.00 0.100±0.02
ENSG00000274654 ENST00000614738 0.037±0.00 0.170±0.00 0.077±0.00 0.112±0.00 0.169±0.04 1.152±0.00 0.097±0.06 N/A 1.745±0.00 0.759±0.46 N/A 0.223±0.21 0.688±0.04 1.023±0.19
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027202 ENSMUST00000028630 N/A N/A N/A 0.024±0.02 0.003±0.00 N/A 0.001±0.00 18.751±4.41 0.001±0.00 0.017±0.00 N/A 0.023±0.01 0.014±0.01 0.147±0.09
ENSMUST00000110494 N/A N/A N/A N/A 0.039±0.00 N/A N/A 17.393±3.16 N/A N/A N/A N/A N/A N/A
ENSMUST00000110495 N/A N/A N/A 0.010±0.00 0.007±0.00 N/A 0.006±0.00 79.625±11.42 0.001±0.00 0.021±0.01 N/A 0.007±0.00 0.030±0.02 0.086±0.03
ENSMUST00000147095 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 0.020±0.00 N/A 0.020±0.00 N/A
ENSMUSG00000027203 ENSMUST00000051605 1.836±0.93 5.085±0.36 0.999±0.15 3.404±1.10 1.468±0.92 3.107±0.33 0.915±0.37 2.199±0.48 4.503±5.41 1.412±0.42 0.749±0.18 6.583±1.63 3.186±2.30 5.395±0.20
ENSMUST00000082122 7.650±2.00 35.192±12.41 9.760±2.71 25.835±8.81 13.826±5.22 9.604±3.33 11.234±0.26 10.761±2.64 39.385±39.37 10.506±3.58 4.185±1.06 32.798±12.73 48.735±45.42 26.207±28.27
ENSMUST00000133211 N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A 0.322±0.00 N/A N/A 1.537±0.45 0.461±0.19 3.036±2.34
ENSMUSG00000027204 ENSMUST00000028633 35.321±1.45 3.089±0.25 9.136±1.56 1.573±0.71 25.622±2.99 8.391±1.83 8.424±0.62 3.426±0.20 0.623±0.33 15.912±1.43 2.190±1.01 18.072±2.10 4.872±2.15 0.631±0.23
ENSMUST00000103234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035093 ENSMUST00000053699 9.163±1.03 11.749±1.42 6.549±1.59 10.234±4.71 6.999±1.81 8.130±2.43 2.810±0.53 8.389±0.21 3.535±1.98 20.585±1.01 2.078±0.86 7.685±3.03 8.930±3.72 2.081±0.34
ENSMUST00000136450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035109 ENSMUST00000042246 N/A N/A N/A N/A 1.548±0.62 N/A N/A N/A N/A N/A N/A N/A N/A 2.598±1.31
ENSMUST00000110477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110480 N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A
ENSMUST00000157002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053615 ENSMUST00000066157 N/A 0.489±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000068394 ENSMUST00000089776 0.665±0.02 0.498±0.16 0.447±0.00 1.025±0.00 0.479±0.32 0.912±0.13 0.369±0.15 0.401±0.09 1.000±1.15 0.622±0.26 0.239±0.11 1.321±1.23 1.244±0.98 2.834±3.31
ENSMUSG00000085797 ENSMUST00000146845 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 0.027±0.00 0.036±0.00
ENSMUSG00000086416 ENSMUST00000123574 0.040±0.00 N/A 0.003±0.00 0.063±0.02 N/A N/A N/A 0.449±0.05 0.012±0.01 N/A N/A 0.049±0.03 0.030±0.02 0.011±0.00
ENSMUSG00000087682 ENSMUST00000130919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A
ENSMUSG00000091337 ENSMUST00000164756 25.097±12.88 42.764±5.86 33.689±0.17 131.049±13.89 18.540±9.35 16.453±5.49 9.446±2.42 14.478±4.91 18.168±11.59 30.848±5.93 9.016±0.93 35.812±13.13 19.436±4.90 5.266±0.93

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