C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SHC (Src homology 2 domain containing) family, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035109 Shc4 10090 - 2:125627447-125724148 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042246 Shc4-001 125627447-125723387 protein_coding
  ENSMUST00000110477 Shc4-003 125629065-125673502 protein_coding
  ENSMUST00000110480 Shc4-002 125627447-125673632 protein_coding
  ENSMUST00000157002 Shc4-004 125691910-125724148 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverTestisENSMUST00000042246ENSMUST00000110480
Transcript ID Breast Liver Testis
ENSMUST00000042246 1.548±0.62 N/A 2.598±1.31
ENSMUST00000110480 N/A 0.184±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GC CIL_0008GC_0002 VISTA 2:125191395-125793910
CIL_0004NF CIL_0004NF_0002 CGP 2:125563088-125724148
CIL_0004NA CIL_0004NA_0002 CGP 2:125627447-125724148

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0006915 IMP apoptotic process
GO:0008284 IMP positive regulation of cell proliferation
GO:0010468 IMP regulation of gene expression
GO:0019904 IPI protein domain specific binding
GO:0030054 IEA cell junction
GO:0030971 IPI receptor tyrosine kinase binding
GO:0035556 IEA intracellular signal transduction
GO:0045211 IEA postsynaptic membrane
GO:0048863 IMP stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000185634 SHC4 SHC (Src homology 2 domain containing) family, member 4 protein_coding Homo_sapiens

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