C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 15 open reading frame 41
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186073 C15orf41 9606 + 15:36579611-36810248 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338183 C15orf41-201 36640605-36810231 protein_coding
  ENST00000437989 C15orf41-002 36579844-36810244 protein_coding
  ENST00000562489 C15orf41-014 36702009-36808781 protein_coding
  ENST00000562877 C15orf41-004 36594900-36808453 protein_coding
  ENST00000563167 C15orf41-013 36755945-36809347 protein_coding
  ENST00000564586 C15orf41-011 36579642-36691754 protein_coding
  ENST00000565792 C15orf41-005 36696407-36810248 processed_transcript
  ENST00000566621 C15orf41-001 36579611-36810223 protein_coding
  ENST00000566677 C15orf41-006 36704313-36809498 retained_intron
  ENST00000566807 C15orf41-010 36594869-36709906 protein_coding
  ENST00000566932 C15orf41-012 36702050-36808457 processed_transcript
  ENST00000567389 C15orf41-003 36594894-36810246 protein_coding
  ENST00000567573 C15orf41-009 36579638-36648757 processed_transcript
  ENST00000569302 C15orf41-008 36579848-36808901 protein_coding
  ENST00000570265 C15orf41-007 36579634-36747256 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338183ENST00000437989ENST00000562489ENST00000562877ENST00000563167ENST00000564586ENST00000566621ENST00000566677ENST00000566932ENST00000567389ENST00000567573ENST00000569302
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338183 N/A N/A N/A N/A N/A N/A N/A 0.571±0.00 0.250±0.00 N/A 0.251±0.00 N/A N/A N/A
ENST00000437989 N/A N/A N/A 0.319±0.00 N/A N/A N/A N/A 0.483±0.00 N/A 1.072±0.00 N/A N/A N/A
ENST00000562489 N/A N/A N/A 0.939±0.00 1.375±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.845±0.00
ENST00000562877 N/A N/A N/A N/A N/A N/A N/A N/A 3.546±0.00 N/A N/A N/A N/A N/A
ENST00000563167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.272±0.00
ENST00000564586 N/A N/A N/A N/A N/A N/A N/A 0.569±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566621 0.299±0.00 1.846±0.00 N/A 0.661±0.00 N/A 1.353±0.00 12.493±0.00 0.368±0.00 0.139±0.00 0.330±0.00 3.593±0.00 1.060±0.58 0.730±0.19 N/A
ENST00000566677 N/A N/A 0.230±0.00 0.072±0.00 0.111±0.00 0.161±0.00 1.238±0.00 N/A N/A 0.292±0.00 0.135±0.00 0.079±0.00 N/A 0.125±0.00
ENST00000566932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.927±0.00 N/A N/A 1.147±0.00
ENST00000567389 N/A N/A N/A N/A N/A N/A 5.684±0.13 N/A N/A N/A N/A 1.600±0.00 N/A N/A
ENST00000567573 N/A N/A N/A 1.013±0.00 N/A 0.829±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569302 N/A N/A N/A N/A N/A 0.486±0.00 N/A 0.728±0.00 1.972±0.00 0.508±0.00 1.587±0.00 N/A 0.197±0.00 1.467±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HI CIL_0006HI_0001 CGP 15:35217345-36810248
CIL_0007MM CIL_0007MM_0001 UCNEbase 15:35253766-37880700
CIL_0008V8 CIL_0008V8_0001 VISTA 15:36226820-36828494
CIL_00088L CIL_00088L_0001 VISTA 15:36372618-36973897
CIL_0008GX CIL_0008GX_0001 VISTA 15:36373931-36975330
CIL_00084J CIL_00084J_0001 VISTA 15:36391617-36991995
CIL_0006QS CIL_0006QS_0001 CGP 15:36579611-37101299

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070461 C17H15orf41 chromosome 15 open reading frame 41 protein_coding Danio_rerio
ENSMUSG00000040282 BC052040 cDNA sequence BC052040 protein_coding Mus_musculus

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