C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 15 open reading frame 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566677 C15orf41-006 ENSG00000186073 9606 + 15:36704313-36809498 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLungMuscleOvaryTestisENST00000566677
Transcript ID Bladder Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000566677 0.230±0.00 0.072±0.00 0.111±0.00 0.161±0.00 1.238±0.00 0.292±0.00 0.135±0.00 0.079±0.00 0.125±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HI CIL_0006HI_0001 CGP 15:35217345-36810248
CIL_0007MM CIL_0007MM_0001 UCNEbase 15:35253766-37880700
CIL_0008V8 CIL_0008V8_0001 VISTA 15:36226820-36828494
CIL_00088L CIL_00088L_0001 VISTA 15:36372618-36973897
CIL_0008GX CIL_0008GX_0001 VISTA 15:36373931-36975330
CIL_00084J CIL_00084J_0001 VISTA 15:36391617-36991995
CIL_0006QS CIL_0006QS_0001 CGP 15:36579611-37101299

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110918 BC052040-001 protein_coding Mus_musculus 0 481
ENSMUST00000166472 BC052040-201 protein_coding Mus_musculus 0 403

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