C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: piccolo presynaptic cytomatrix protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186472 PCLO 9606 - 7:82754013-83162930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333891 PCLO-001 82754013-83162930 protein_coding
  ENST00000413807 PCLO-008 82838218-82879462 nonsense_mediated_decay
  ENST00000423517 PCLO-011 82820477-83162930 protein_coding
  ENST00000426442 PCLO-004 82822097-82894454 processed_transcript
  ENST00000432078 PCLO-010 82801537-82822590 processed_transcript
  ENST00000437081 PCLO-003 82914361-82950748 protein_coding
  ENST00000456006 PCLO-007 82845427-82879462 nonsense_mediated_decay
  ENST00000461143 PCLO-009 82966421-83134610 processed_transcript
  ENST00000618073 PCLO-201 82822109-82879462 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333891ENST00000423517ENST00000437081ENST00000618073
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333891 N/A N/A 3.330±0.00 N/A N/A 0.049±0.00 N/A 0.051±0.04 0.101±0.00 N/A 0.023±0.01 0.006±0.00 N/A
ENST00000423517 N/A 0.390±0.00 3.229±0.21 0.350±0.00 0.119±0.03 0.097±0.04 0.492±0.00 0.206±0.00 0.359±0.00 0.010±0.00 0.023±0.01 0.011±0.00 0.378±0.00
ENST00000437081 0.104±0.00 2.394±0.00 5.975±0.00 0.525±0.01 0.598±0.00 0.160±0.00 N/A 0.105±0.09 0.411±0.33 N/A 0.176±0.03 0.067±0.01 1.321±0.32
ENST00000618073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.04 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005509 ISS calcium ion binding
GO:0005515 IEA protein binding
GO:0005522 ISS profilin binding
GO:0005544 ISS calcium-dependent phospholipid binding
GO:0005856 NAS cytoskeleton
GO:0007010 ISS cytoskeleton organization
GO:0008021 IEA synaptic vesicle
GO:0008152 IEA metabolic process
GO:0014069 IEA postsynaptic density
GO:0016020 IEA membrane
GO:0016079 NAS synaptic vesicle exocytosis
GO:0016491 IEA oxidoreductase activity
GO:0017157 IEA regulation of exocytosis
GO:0019933 IEA cAMP-mediated signaling
GO:0030054 IEA cell junction
GO:0030073 IEA insulin secretion
GO:0045202 ISS:IEA synapse
GO:0046872 IEA metal ion binding
GO:0048788 TAS presynaptic cytoskeletal matrix assembled at active zones
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012482 pclob piccolo (presynaptic cytomatrix protein) b protein_coding Danio_rerio
ENSDARG00000063299 pcloa piccolo (presynaptic cytomatrix protein) a protein_coding Danio_rerio
ENSMUSG00000061601 Pclo piccolo (presynaptic cytomatrix protein) protein_coding Mus_musculus

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