C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: piccolo presynaptic cytomatrix protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423517 PCLO-011 ENSG00000186472 9606 - 7:82820477-83162930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000423517
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000423517 0.390±0.00 3.229±0.21 0.350±0.00 0.119±0.03 0.097±0.04 0.492±0.00 0.206±0.00 0.359±0.00 0.010±0.00 0.023±0.01 0.011±0.00 0.378±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005509 ISS calcium ion binding
GO:0005515 IEA protein binding
GO:0005522 ISS profilin binding
GO:0005544 ISS calcium-dependent phospholipid binding
GO:0005856 NAS cytoskeleton
GO:0007010 ISS cytoskeleton organization
GO:0008021 IEA synaptic vesicle
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016079 NAS synaptic vesicle exocytosis
GO:0016491 IEA oxidoreductase activity
GO:0030054 IEA cell junction
GO:0045202 ISS:IEA synapse
GO:0046872 IEA metal ion binding
GO:0048788 TAS presynaptic cytoskeletal matrix assembled at active zones
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182407 Pclo-002 protein_coding Mus_musculus 0 13390
ENSMUST00000030691 Pclo-001 protein_coding Mus_musculus 0 13070
ENSMUST00000182426 Pclo-003 retained_intron Mus_musculus 0 6931
ENSMUST00000182915 Pclo-004 protein_coding Mus_musculus 0 2601

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