C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: piccolo presynaptic cytomatrix protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618073 PCLO-201 ENSG00000186472 9606 - 7:82822109-82879462 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000618073
Transcript ID Placenta
ENST00000618073 0.088±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005509 ISS calcium ion binding
GO:0005515 IEA protein binding
GO:0005522 ISS profilin binding
GO:0005544 ISS calcium-dependent phospholipid binding
GO:0005856 NAS cytoskeleton
GO:0007010 ISS cytoskeleton organization
GO:0008021 IEA synaptic vesicle
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016079 NAS synaptic vesicle exocytosis
GO:0016491 IEA oxidoreductase activity
GO:0030054 IEA cell junction
GO:0045202 ISS synapse
GO:0048788 TAS presynaptic cytoskeletal matrix assembled at active zones
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182915 Pclo-004 protein_coding Mus_musculus 0 1736
ENSMUST00000182407 Pclo-002 protein_coding Mus_musculus 0 1736
ENSMUST00000182426 Pclo-003 retained_intron Mus_musculus 0 1528
ENSMUST00000030691 Pclo-001 protein_coding Mus_musculus 0 1419

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