C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase type 13A5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187527 ATP13A5 9606 - 3:193274790-193378843 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342358 ATP13A5-001 193274790-193378843 protein_coding
  ENST00000446087 ATP13A5-005 193362614-193378820 protein_coding
  ENST00000488957 ATP13A5-003 193312701-193324012 retained_intron
  ENST00000495496 ATP13A5-004 193274889-193313363 processed_transcript
  ENST00000620313 ATP13A5-201 193274796-193284948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000342358ENST00000446087ENST00000488957ENST00000495496ENST00000620313
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000342358 N/A 0.003±0.00 N/A N/A 0.567±0.00 0.044±0.00 0.011±0.00 0.028±0.00 N/A 0.027±0.00 N/A N/A 0.023±0.00
ENST00000446087 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A
ENST00000488957 0.044±0.00 N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A 0.004±0.00 N/A
ENST00000495496 N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A N/A 0.018±0.00 N/A N/A N/A
ENST00000620313 N/A N/A N/A 0.553±0.00 0.974±0.00 N/A N/A 0.135±0.00 N/A 0.078±0.00 0.695±0.00 0.043±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DT CIL_0000DT_0001 CGP 3:192796815-193277738
CIL_0000N6 CIL_0000N6_0001 CGP 3:193241125-193378843
CIL_0000N5 CIL_0000N5_0001 CGP 3:193274790-193593111

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006812 IEA cation transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043018 CU694233.1 ATPase type 13A4 protein_coding Danio_rerio
ENSMUSG00000048939 Atp13a5 ATPase type 13A5 protein_coding Mus_musculus

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