C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase type 13A5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342358 ATP13A5-001 ENSG00000187527 9606 - 3:193274790-193378843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLungTestisENST00000342358
Transcript ID Adrenal Breast Colon Heart Kidney Lung Testis
ENST00000342358 0.003±0.00 0.567±0.00 0.044±0.00 0.011±0.00 0.028±0.00 0.027±0.00 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DT CIL_0000DT_0001 CGP 3:192796815-193277738
CIL_0000N6 CIL_0000N6_0001 CGP 3:193241125-193378843
CIL_0000N5 CIL_0000N5_0001 CGP 3:193274790-193593111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006812 IEA cation transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075806 Atp13a5-001 protein_coding Mus_musculus 0 3515
ENSMUST00000142681 Atp13a5-002 nonsense_mediated_decay Mus_musculus 0 2931
ENSMUST00000143373 Atp13a5-003 protein_coding Mus_musculus 0 2750
ENSMUST00000152040 Atp13a5-004 protein_coding Mus_musculus 0 374

Loading