C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase type 13A5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048939 Atp13a5 10090 - 16:29231851-29378732 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075806 Atp13a5-001 29231851-29378732 protein_coding
  ENSMUST00000142681 Atp13a5-002 29231914-29378706 nonsense_mediated_decay
  ENSMUST00000143373 Atp13a5-003 29232460-29378667 protein_coding
  ENSMUST00000152040 Atp13a5-004 29333965-29378583 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075806ENSMUST00000142681ENSMUST00000143373ENSMUST00000152040
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075806 N/A 0.412±0.30 0.050±0.00 0.006±0.00 0.007±0.00 0.007±0.01 0.053±0.00 0.398±0.12 1.838±1.85 0.002±0.00 0.003±0.00
ENSMUST00000142681 N/A N/A N/A 0.020±0.01 N/A 0.008±0.01 0.039±0.00 N/A 1.690±0.93 0.026±0.02 0.019±0.01
ENSMUST00000143373 N/A 0.775±0.00 0.131±0.00 N/A 0.008±0.00 0.018±0.01 0.034±0.01 0.213±0.08 1.202±0.61 0.024±0.01 0.011±0.00
ENSMUST00000152040 0.098±0.04 N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N6 CIL_0000N6_0002 CGP 16:29209695-29378732
CIL_0000N5 CIL_0000N5_0002 CGP 16:29231851-29544864

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006812 IEA cation transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043018 CU694233.1 ATPase type 13A4 protein_coding Danio_rerio
ENSG00000187527 ATP13A5 ATPase type 13A5 protein_coding Homo_sapiens

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