C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microspherule protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187778 MCRS1 9606 - 12:49556544-49568153 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343810 MCRS1-001 49558320-49568153 protein_coding
  ENST00000357123 MCRS1-002 49558643-49566439 protein_coding
  ENST00000546244 MCRS1-201 49558295-49568145 protein_coding
  ENST00000547182 MCRS1-009 49558573-49563075 processed_transcript
  ENST00000548334 MCRS1-014 49563487-49567832 protein_coding
  ENST00000548596 MCRS1-013 49564481-49567873 protein_coding
  ENST00000548602 MCRS1-003 49558301-49568131 nonsense_mediated_decay
  ENST00000548646 MCRS1-008 49558504-49559780 nonsense_mediated_decay
  ENST00000549000 MCRS1-005 49559013-49568132 retained_intron
  ENST00000549528 MCRS1-015 49564763-49567850 protein_coding
  ENST00000550165 MCRS1-006 49558363-49568101 protein_coding
  ENST00000551598 MCRS1-007 49556544-49560302 protein_coding
  ENST00000551625 MCRS1-004 49558302-49567750 retained_intron
  ENST00000552206 MCRS1-011 49565530-49568128 retained_intron
  ENST00000552596 MCRS1-010 49558479-49559260 retained_intron
  ENST00000553173 MCRS1-012 49559738-49568100 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343810ENST00000357123ENST00000546244ENST00000547182ENST00000548334ENST00000548602ENST00000549528ENST00000550165ENST00000551598ENST00000551625ENST00000552206ENST00000553173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343810 3.464±0.00 4.647±0.00 0.657±0.00 5.049±2.84 3.995±3.34 5.481±0.00 12.807±12.18 9.976±0.00 10.122±0.00 3.143±2.35 2.947±2.15 22.331±5.14 22.751±6.20 22.521±2.85
ENST00000357123 5.458±0.00 7.108±0.00 N/A N/A 5.541±0.00 3.292±0.00 N/A N/A N/A N/A N/A 5.426±0.00 N/A 9.199±0.00
ENST00000546244 N/A N/A N/A 2.105±0.00 N/A N/A 0.384±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000547182 N/A N/A N/A N/A 1.816±0.00 N/A N/A N/A N/A N/A 6.483±0.00 10.259±7.49 N/A 17.093±0.00
ENST00000548334 N/A N/A N/A N/A N/A N/A N/A 1.001±0.00 N/A N/A N/A N/A N/A N/A
ENST00000548602 3.059±0.00 10.052±0.00 N/A 6.926±0.00 5.237±0.00 1.486±0.35 8.924±0.00 6.629±0.00 N/A 5.009±0.00 2.430±1.31 6.237±1.86 6.639±0.51 13.941±0.00
ENST00000549528 N/A N/A 1.499±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.360±0.00 5.867±0.00
ENST00000551598 N/A N/A N/A N/A N/A N/A N/A 5.576±0.00 0.909±0.00 N/A N/A N/A N/A N/A
ENST00000551625 N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.598±0.00 N/A N/A
ENST00000552206 N/A N/A N/A N/A N/A N/A N/A 0.842±0.00 N/A N/A N/A N/A N/A N/A
ENST00000553173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.836±0.00 N/A 14.247±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009M CIL_00009M_0001 CGP 12:49366584-49558308
CIL_00009P CIL_00009P_0001 CGP 12:49539157-49568153

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000123 IDA histone acetyltransferase complex
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 TAS cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006464 TAS cellular protein modification process
GO:0031011 IDA Ino80 complex
GO:0043981 IDA histone H4-K5 acetylation
GO:0043982 IDA histone H4-K8 acetylation
GO:0043984 IDA histone H4-K16 acetylation
GO:0043995 IDA histone acetyltransferase activity (H4-K5 specific)
GO:0043996 IDA histone acetyltransferase activity (H4-K8 specific)
GO:0046972 IDA histone acetyltransferase activity (H4-K16 specific)
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020840 mcrs1 microspherule protein 1 protein_coding Danio_rerio
ENSMUSG00000037570 Mcrs1 microspherule protein 1 protein_coding Mus_musculus

Loading