C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00009P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135519-ENSG00000187778 CGP 9606 12:49539157-49568153
GeneTranscriptPositionBiotype
ENSG00000135519 (KCNH3)
potassium voltage-gated channel, subfamily H (eag-related), member 3 		ENST00000257981 (KCNH3-001) 49539157-49558308 protein_coding
ENST00000548675 (KCNH3-004) 49556172-49557637 retained_intron
ENST00000550434 (KCNH3-002) 49541094-49543878 processed_transcript
ENST00000551415 (KCNH3-003) 49544254-49546240 processed_transcript
ENSG00000187778 (MCRS1)
microspherule protein 1 		ENST00000343810 (MCRS1-001) 49558320-49568153 protein_coding
ENST00000357123 (MCRS1-002) 49558643-49566439 protein_coding
ENST00000546244 (MCRS1-201) 49558295-49568145 protein_coding
ENST00000547182 (MCRS1-009) 49558573-49563075 processed_transcript
ENST00000548334 (MCRS1-014) 49563487-49567832 protein_coding
ENST00000548596 (MCRS1-013) 49564481-49567873 protein_coding
ENST00000548602 (MCRS1-003) 49558301-49568131 nonsense_mediated_decay
ENST00000548646 (MCRS1-008) 49558504-49559780 nonsense_mediated_decay
ENST00000549000 (MCRS1-005) 49559013-49568132 retained_intron
ENST00000549528 (MCRS1-015) 49564763-49567850 protein_coding
ENST00000550165 (MCRS1-006) 49558363-49568101 protein_coding
ENST00000551598 (MCRS1-007) 49556544-49560302 protein_coding
ENST00000551625 (MCRS1-004) 49558302-49567750 retained_intron
ENST00000552206 (MCRS1-011) 49565530-49568128 retained_intron
ENST00000552596 (MCRS1-010) 49558479-49559260 retained_intron
ENST00000553173 (MCRS1-012) 49559738-49568100 protein_coding
CIL_00009P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037579-ENSMUSG00000037570 CGP 10090 15:99224976-99251961
GeneTranscriptPositionBiotype
ENSMUSG00000037570 (Mcrs1)
microspherule protein 1 		ENSMUST00000041190 (Mcrs1-201) 99242818-99251961 protein_coding
ENSMUST00000163506 (Mcrs1-202) 99242818-99251961 protein_coding
ENSMUSG00000037579 (Kcnh3)
potassium voltage-gated channel, subfamily H (eag-related), member 3 		ENSMUST00000041415 (Kcnh3-201) 99224976-99242817 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00009P_0001ENSG00000135519ENST00000257981ENST00000548675ENST00000550434ENST00000551415ENSG00000187778ENST00000343810ENST00000357123ENST00000546244ENST00000547182ENST00000548334ENST00000548596ENST00000548602ENST00000548646ENST00000549000ENST00000549528ENST00000550165ENST00000551598ENST00000551625ENST00000552206ENST00000552596ENST00000553173CIL_00009P_0002ENSMUSG00000037570ENSMUST00000041190ENSMUST00000163506ENSMUSG00000037579ENSMUST00000041415
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00009P_0001ENSG00000135519ENST00000257981ENSG00000187778ENST00000343810ENST00000357123ENST00000546244ENST00000547182ENST00000548334ENST00000548602ENST00000549528ENST00000550165ENST00000551598ENST00000551625ENST00000552206ENST00000553173CIL_00009P_0002ENSMUSG00000037570ENSMUST00000041190ENSMUST00000163506ENSMUSG00000037579ENSMUST00000041415
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135519 ENST00000257981 N/A N/A 0.239±0.00 11.406±5.38 N/A N/A N/A N/A 0.121±0.00 1.557±0.00 N/A N/A N/A N/A
ENST00000548675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187778 ENST00000343810 3.464±0.00 4.647±0.00 0.657±0.00 5.049±2.84 3.995±3.34 5.481±0.00 12.807±12.18 9.976±0.00 10.122±0.00 3.143±2.35 2.947±2.15 22.331±5.14 22.751±6.20 22.521±2.85
ENST00000357123 5.458±0.00 7.108±0.00 N/A N/A 5.541±0.00 3.292±0.00 N/A N/A N/A N/A N/A 5.426±0.00 N/A 9.199±0.00
ENST00000546244 N/A N/A N/A 2.105±0.00 N/A N/A 0.384±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000547182 N/A N/A N/A N/A 1.816±0.00 N/A N/A N/A N/A N/A 6.483±0.00 10.259±7.49 N/A 17.093±0.00
ENST00000548334 N/A N/A N/A N/A N/A N/A N/A 1.001±0.00 N/A N/A N/A N/A N/A N/A
ENST00000548596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548602 3.059±0.00 10.052±0.00 N/A 6.926±0.00 5.237±0.00 1.486±0.35 8.924±0.00 6.629±0.00 N/A 5.009±0.00 2.430±1.31 6.237±1.86 6.639±0.51 13.941±0.00
ENST00000548646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549528 N/A N/A 1.499±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.360±0.00 5.867±0.00
ENST00000551598 N/A N/A N/A N/A N/A N/A N/A 5.576±0.00 0.909±0.00 N/A N/A N/A N/A N/A
ENST00000551625 N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.598±0.00 N/A N/A
ENST00000552206 N/A N/A N/A N/A N/A N/A N/A 0.842±0.00 N/A N/A N/A N/A N/A N/A
ENST00000552596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.836±0.00 N/A 14.247±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037570 ENSMUST00000041190 15.085±1.65 17.569±3.08 19.249±1.38 36.207±6.00 14.792±2.26 15.915±2.80 11.351±5.27 17.998±2.79 8.075±5.37 19.849±2.15 8.474±1.79 19.791±3.97 26.341±5.34 33.124±10.72
ENSMUST00000163506 4.406±0.00 6.987±2.00 3.199±0.00 15.613±0.00 6.758±2.30 5.729±2.44 N/A 6.389±2.90 3.357±2.31 N/A N/A 15.134±4.46 5.435±0.16 7.095±0.00
ENSMUSG00000037579 ENSMUST00000041415 1.401±1.06 0.539±0.20 0.065±0.00 20.959±18.88 0.402±0.21 12.003±1.29 0.109±0.05 0.146±0.03 0.051±0.05 1.422±0.22 0.035±0.00 3.961±1.70 0.065±0.04 0.295±0.13

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