C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HEPACAM family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453812 HEPACAM2-003 ENSG00000188175 9606 - 7:93188879-93226469 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaTestisENST00000453812
Transcript ID Brain Colon Kidney Liver Ovary Placenta Testis
ENST00000453812 0.004±0.00 1.003±0.00 1.688±1.66 0.024±0.00 0.041±0.04 0.050±0.00 0.900±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E8 CIL_0008E8_0001 VISTA 7:92945640-93549905
CIL_0006E0 CIL_0006E0_0001 CGP 7:93130055-93226524
CIL_0004ST CIL_0004ST_0002 CGP 7:93188586-93361121

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005794 IDA Golgi apparatus
GO:0005813 IDA centrosome
GO:0005819 IDA spindle
GO:0007067 IEA mitotic nuclear division
GO:0016021 IEA integral component of membrane
GO:0030496 IDA midbody
GO:0051297 IMP centrosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049985 Hepacam2-001 protein_coding Mus_musculus 0 1435
ENSMUST00000184466 Hepacam2-002 nonsense_mediated_decay Mus_musculus 0 1301
ENSMUST00000183736 Hepacam2-004 protein_coding Mus_musculus 0 647
ENSMUST00000184051 Hepacam2-003 retained_intron Mus_musculus 0 464

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