C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 120B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188735 TMEM120B 9606 + 12:121712752-121783001 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342607 TMEM120B-001 121712752-121778956 nonsense_mediated_decay
  ENST00000411958 TMEM120B-008 121776284-121778356 processed_transcript
  ENST00000416147 TMEM120B-007 121776263-121780750 processed_transcript
  ENST00000449592 TMEM120B-002 121712795-121782062 protein_coding
  ENST00000538055 TMEM120B-004 121776375-121783001 processed_transcript
  ENST00000540377 TMEM120B-006 121752129-121776158 protein_coding
  ENST00000541467 TMEM120B-003 121743623-121777789 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000342607ENST00000449592ENST00000541467
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000342607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.559±1.87 1.944±0.00
ENST00000449592 0.576±0.00 2.876±0.00 0.665±0.00 0.247±0.00 4.801±0.00 0.637±0.15 0.696±0.00 0.745±0.54 0.462±0.00 1.453±0.00 1.547±0.00 2.017±0.42 0.501±0.05
ENST00000541467 0.950±0.00 N/A N/A 0.901±0.00 N/A N/A 0.973±0.42 N/A 1.086±0.00 1.058±0.00 2.663±0.42 N/A 1.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0002 CGP 12:121651118-121783001
CIL_0000F9 CIL_0000F9_0002 CGP 12:121712752-121803403

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042929 tmem120b transmembrane protein 120B protein_coding Danio_rerio
ENSMUSG00000054434 Tmem120b transmembrane protein 120B protein_coding Mus_musculus

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