C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 120B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054434 Tmem120b 10090 + 5:123068415-123117749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067505 Tmem120b-001 123076275-123117749 protein_coding
  ENSMUST00000111619 Tmem120b-002 123076326-123117009 protein_coding
  ENSMUST00000160344 Tmem120b-007 123076341-123115145 protein_coding
  ENSMUST00000160489 Tmem120b-005 123076351-123104587 retained_intron
  ENSMUST00000161049 Tmem120b-006 123099901-123115819 retained_intron
  ENSMUST00000161059 Tmem120b-004 123076325-123115127 nonsense_mediated_decay
  ENSMUST00000161660 Tmem120b-008 123068415-123114589 processed_transcript
  ENSMUST00000162104 Tmem120b-003 123076370-123100368 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067505ENSMUST00000111619ENSMUST00000160344ENSMUST00000160489ENSMUST00000161049ENSMUST00000161059
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067505 35.220±15.49 6.162±3.09 2.341±0.72 21.447±3.62 2.122±0.75 3.840±0.49 4.761±5.00 3.633±0.59 4.592±0.53 2.796±1.27 4.746±3.01 0.171±0.10
ENSMUST00000111619 21.331±10.05 14.207±5.90 1.600±0.24 17.928±6.78 1.458±0.57 2.932±0.22 2.845±2.98 3.545±0.39 1.560±0.51 3.682±1.51 2.767±1.11 0.341±0.05
ENSMUST00000160344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.403±0.00
ENSMUST00000160489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.742±0.00 N/A
ENSMUST00000161049 N/A N/A N/A 23.192±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161059 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.444±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0003 CGP 5:123035769-123117749
CIL_0000F9 CIL_0000F9_0003 CGP 5:123068415-123132692

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042929 tmem120b transmembrane protein 120B protein_coding Danio_rerio
ENSG00000188735 TMEM120B transmembrane protein 120B protein_coding Homo_sapiens

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