C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 120B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342607 TMEM120B-001 ENSG00000188735 9606 + 12:121712752-121778956 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000342607
Transcript ID Ovary Placenta
ENST00000342607 2.559±1.87 1.944±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0002 CGP 12:121651118-121783001
CIL_0000F9 CIL_0000F9_0002 CGP 12:121712752-121803403

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067505 Tmem120b-001 protein_coding Mus_musculus 0 1387
ENSMUST00000111619 Tmem120b-002 protein_coding Mus_musculus 0 929
ENSMUST00000161049 Tmem120b-006 retained_intron Mus_musculus 0 743
ENSMUST00000030474 Nsun4-002 nonsense_mediated_decay Mus_musculus 0.00005 55

Loading