C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sp6 transcription factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000189120 SP6 9606 - 17:47844908-47855874 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342234 SP6-001 47844908-47855874 protein_coding
  ENST00000536300 SP6-002 47844914-47851193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342234ENST00000536300
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342234 0.362±0.00 0.724±0.00 N/A N/A 0.165±0.07 N/A N/A 0.434±0.00 0.426±0.21 N/A 0.779±0.38 3.671±1.11 N/A
ENST00000536300 0.289±0.00 3.620±0.00 0.394±0.00 0.706±0.00 N/A 0.165±0.10 0.824±0.00 0.017±0.00 3.998±0.00 0.050±0.00 2.523±2.43 21.666±10.26 0.548±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008284 IEA positive regulation of cell proliferation
GO:0042481 IEA regulation of odontogenesis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090586 SP6 Sp6 transcription factor protein_coding Danio_rerio
ENSMUSG00000038560 Sp6 trans-acting transcription factor 6 protein_coding Mus_musculus

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