C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sp6 transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536300 SP6-002 ENSG00000189120 9606 - 17:47844914-47851193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000536300
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000536300 0.289±0.00 3.620±0.00 0.394±0.00 0.706±0.00 0.165±0.10 0.824±0.00 0.017±0.00 3.998±0.00 0.050±0.00 2.523±2.43 21.666±10.26 0.548±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008284 IEA positive regulation of cell proliferation
GO:0042481 IEA regulation of odontogenesis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107622 Sp6-002 protein_coding Mus_musculus 0 1705
ENSMUST00000047997 Sp6-001 protein_coding Mus_musculus 0 1580
ENSMUST00000090813 Sp9-001 protein_coding Mus_musculus 0 254
ENSMUST00000063918 Sp8-201 protein_coding Mus_musculus 0 231
ENSMUST00000100043 Sp5-001 protein_coding Mus_musculus 0 211

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