C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated, serine-rich 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196141 SPATS2L 9606 + 2:200305881-200482263 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358677 SPATS2L-001 200305986-200482263 protein_coding
  ENST00000360760 SPATS2L-008 200306524-200478530 protein_coding
  ENST00000366118 SPATS2L-026 200440649-200461337 protein_coding
  ENST00000409140 SPATS2L-005 200306708-200478530 protein_coding
  ENST00000409151 SPATS2L-010 200351189-200478209 protein_coding
  ENST00000409385 SPATS2L-003 200306159-200478529 protein_coding
  ENST00000409397 SPATS2L-023 200306872-200469960 protein_coding
  ENST00000409718 SPATS2L-002 200305893-200478530 protein_coding
  ENST00000409755 SPATS2L-201 200306708-200478529 protein_coding
  ENST00000409988 SPATS2L-004 200306151-200478529 protein_coding
  ENST00000421573 SPATS2L-019 200378005-200439139 protein_coding
  ENST00000423749 SPATS2L-016 200306553-200419470 protein_coding
  ENST00000428692 SPATS2L-017 200306554-200389283 protein_coding
  ENST00000438761 SPATS2L-021 200393077-200467378 protein_coding
  ENST00000439084 SPATS2L-011 200305881-200419333 protein_coding
  ENST00000439395 SPATS2L-012 200306276-200419397 protein_coding
  ENST00000444012 SPATS2L-013 200306283-200412342 protein_coding
  ENST00000449647 SPATS2L-022 200378237-200440724 protein_coding
  ENST00000451764 SPATS2L-014 200306376-200478102 protein_coding
  ENST00000453663 SPATS2L-020 200306568-200440784 protein_coding
  ENST00000457757 SPATS2L-015 200306554-200439240 protein_coding
  ENST00000459656 SPATS2L-006 200306718-200390868 retained_intron
  ENST00000460095 SPATS2L-025 200469914-200478146 processed_transcript
  ENST00000462190 SPATS2L-024 200469740-200477882 retained_intron
  ENST00000468832 SPATS2L-027 200463253-200473047 processed_transcript
  ENST00000471533 SPATS2L-018 200306727-200372191 processed_transcript
  ENST00000471601 SPATS2L-009 200306554-200390854 retained_intron
  ENST00000619961 SPATS2L-202 200308950-200482256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358677ENST00000360760ENST00000409140ENST00000409385ENST00000409397ENST00000409755ENST00000409988ENST00000453663ENST00000460095ENST00000468832ENST00000619961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358677 3.968±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000360760 8.356±0.00 8.750±0.00 3.146±0.00 8.123±1.51 7.657±1.56 10.908±6.84 9.505±7.62 14.064±5.53 9.433±3.02 9.197±5.46 6.231±0.00 17.413±13.52 12.954±0.28 15.682±0.00
ENST00000409140 N/A N/A 1.666±0.00 2.542±0.00 N/A 4.304±0.00 1.043±0.00 3.284±0.00 2.066±0.00 N/A N/A 3.821±0.00 5.997±0.00 N/A
ENST00000409385 N/A N/A N/A 2.345±0.00 N/A N/A N/A N/A N/A N/A 1.564±0.00 N/A N/A N/A
ENST00000409397 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.329±0.00 N/A N/A N/A N/A
ENST00000409755 N/A N/A N/A 5.610±0.00 N/A 7.858±0.00 4.624±3.47 6.171±2.88 3.581±0.00 8.131±0.00 2.167±0.00 12.242±6.41 9.675±3.58 11.961±0.07
ENST00000409988 N/A N/A 1.475±0.00 N/A N/A N/A N/A 2.592±0.00 N/A 1.768±0.00 N/A 4.162±0.00 N/A N/A
ENST00000453663 N/A N/A 4.456±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.183±0.00 N/A
ENST00000460095 17.889±0.00 15.354±0.00 N/A 16.921±0.00 N/A 20.256±0.00 22.173±0.00 23.576±0.00 13.626±0.00 24.408±0.00 7.541±2.15 N/A N/A 28.650±0.00
ENST00000468832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.586±0.00 N/A
ENST00000619961 N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A 0.752±0.00 1.190±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B1 CIL_0002B1_0001 CGP 2:199955317-200482263
CIL_0002B2 CIL_0002B2_0001 CGP 2:200305881-200519784

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0043234 IDA protein complex
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000038305 Spats2l spermatogenesis associated, serine-rich 2-like protein_coding Mus_musculus

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