C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated, serine-rich 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038305 Spats2l 10090 + 1:57774162-57948394 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000163239 Spats2l-010 57774365-57946964 protein_coding
  ENSMUST00000163922 Spats2l-004 57774419-57800438 retained_intron
  ENSMUST00000164302 Spats2l-011 57774755-57946965 protein_coding
  ENSMUST00000164353 Spats2l-015 57902071-57940374 retained_intron
  ENSMUST00000165235 Spats2l-013 57774912-57832306 retained_intron
  ENSMUST00000167085 Spats2l-001 57774861-57948394 protein_coding
  ENSMUST00000167971 Spats2l-008 57774600-57885836 protein_coding
  ENSMUST00000168016 Spats2l-003 57774890-57857541 retained_intron
  ENSMUST00000168895 Spats2l-009 57774917-57799580 retained_intron
  ENSMUST00000168905 Spats2l-007 57774249-57879723 retained_intron
  ENSMUST00000169772 Spats2l-002 57845571-57946965 protein_coding
  ENSMUST00000170139 Spats2l-012 57774735-57946965 protein_coding
  ENSMUST00000171699 Spats2l-014 57774744-57938021 protein_coding
  ENSMUST00000172068 Spats2l-006 57774301-57902109 protein_coding
  ENSMUST00000172287 Spats2l-005 57774162-57885768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000163239ENSMUST00000163922ENSMUST00000164302ENSMUST00000164353ENSMUST00000165235ENSMUST00000167085ENSMUST00000167971ENSMUST00000168016ENSMUST00000168905ENSMUST00000169772ENSMUST00000170139ENSMUST00000172068
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000163239 N/A N/A N/A 3.734±0.00 N/A N/A 0.556±0.07 1.397±0.52 0.554±0.04 1.312±0.21 0.198±0.07 1.636±0.00 1.179±0.51 N/A
ENSMUST00000163922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00
ENSMUST00000164302 1.572±0.98 N/A 3.477±0.18 4.110±0.00 0.502±0.00 1.559±0.21 1.056±0.16 1.670±0.21 0.470±0.31 1.507±0.24 0.195±0.07 1.835±1.00 1.681±0.25 0.212±0.00
ENSMUST00000164353 N/A N/A N/A 24.758±0.00 N/A N/A N/A N/A N/A N/A N/A 24.580±0.00 11.420±5.76 N/A
ENSMUST00000165235 N/A 3.784±0.61 N/A N/A 2.387±0.42 N/A N/A N/A N/A 3.825±0.00 N/A 5.267±1.57 N/A N/A
ENSMUST00000167085 2.707±1.51 0.388±0.14 4.693±0.11 2.892±1.87 1.108±0.38 1.841±0.36 0.735±0.07 1.563±0.31 0.469±0.41 2.795±0.34 0.192±0.06 2.149±1.00 1.311±0.84 0.066±0.00
ENSMUST00000167971 N/A N/A N/A 5.449±0.00 1.351±0.00 2.344±0.00 N/A N/A N/A N/A N/A 3.328±0.00 2.330±0.29 0.353±0.00
ENSMUST00000168016 N/A 0.314±0.01 N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A 0.045±0.00
ENSMUST00000168905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00
ENSMUST00000169772 N/A N/A 2.450±0.00 2.599±0.55 N/A 1.693±0.44 N/A 1.497±0.00 1.134±0.66 N/A 0.297±0.00 2.077±0.91 3.688±1.84 0.122±0.00
ENSMUST00000170139 2.613±0.00 N/A 3.039±0.52 6.529±1.97 N/A 0.970±0.11 0.610±0.05 N/A N/A N/A 0.192±0.08 2.344±0.00 N/A 0.184±0.00
ENSMUST00000172068 N/A N/A N/A N/A N/A N/A 1.012±0.00 N/A N/A N/A N/A N/A N/A 0.265±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B1 CIL_0002B1_0002 CGP 1:57406328-57948394
CIL_0002B2 CIL_0002B2_0002 CGP 1:57774162-58018956

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0043234 IEA protein complex
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196141 SPATS2L spermatogenesis associated, serine-rich 2-like protein_coding Homo_sapiens

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