C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: suppressor of Ty 3 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196284 SUPT3H 9606 - 6:44809317-45377953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306867 SUPT3H-201 44826730-45106015 protein_coding
  ENST00000371458 SUPT3H-004 44829767-44955510 protein_coding
  ENST00000371459 SUPT3H-006 44828845-45377933 protein_coding
  ENST00000371460 SUPT3H-005 44828732-45377933 protein_coding
  ENST00000459689 SUPT3H-003 45250955-45377423 processed_transcript
  ENST00000475057 SUPT3H-001 44809317-45377953 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306867ENST00000371458ENST00000371459ENST00000371460ENST00000475057
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306867 N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A 0.070±0.00 N/A N/A 0.558±0.00 N/A N/A
ENST00000371458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A
ENST00000371459 N/A 0.362±0.00 N/A 0.402±0.00 0.388±0.10 0.700±0.24 0.119±0.00 0.779±0.00 0.089±0.00 0.506±0.17 N/A 0.783±0.29 1.183±0.40 2.609±0.31
ENST00000371460 0.160±0.00 N/A 0.878±0.00 N/A N/A N/A 0.067±0.00 N/A 0.631±0.00 N/A N/A 0.579±0.00 0.512±0.00 N/A
ENST00000475057 1.766±0.00 0.873±0.00 0.410±0.00 4.624±3.40 1.742±0.24 3.794±0.00 0.214±0.02 2.325±0.00 0.660±0.43 1.050±0.07 0.860±0.00 2.129±2.37 1.349±0.18 5.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DS CIL_0008DS_0001 VISTA 6:44250447-44853640
CIL_00028U CIL_00028U_0002 CGP 6:44387525-45377953
CIL_00028T CIL_00028T_0002 CGP 6:44809317-45664349

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0004402 IDA histone acetyltransferase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006325 TAS chromatin organization
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016578 IDA histone deubiquitination
GO:0030914 IDA STAGA complex
GO:0033276 IDA transcription factor TFTC complex
GO:0043966 IDA histone H3 acetylation
GO:0045893 NAS positive regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002776 supt3h suppressor of Ty 3 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000038954 Supt3 suppressor of Ty 3 protein_coding Mus_musculus

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