C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00028T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002776-ENSDARG00000040261 CGP 7955 17:4951306-5258943
GeneTranscriptPositionBiotype
ENSDARG00000002776 (supt3h)
suppressor of Ty 3 homolog (S. cerevisiae) 		ENSDART00000026904 (supt3h-201) 4951306-4998460 protein_coding
ENSDART00000141251 (supt3h-002) 4963581-5095174 protein_coding
ENSDART00000141598 (supt3h-001) 4963581-5166425 protein_coding
ENSDART00000143104 (supt3h-003) 4985590-5038811 processed_transcript
CIL_00028T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196284-ENSG00000124813 CGP 9606 6:44809317-45664349
GeneTranscriptPositionBiotype
ENSG00000124813 (RUNX2)
runt-related transcription factor 2 		ENST00000359524 (RUNX2-001) 45422485-45551079 protein_coding
ENST00000371432 (RUNX2-201) 45328317-45551082 protein_coding
ENST00000371436 (RUNX2-004) 45328727-45547393 protein_coding
ENST00000371438 (RUNX2-003) 45328369-45551079 protein_coding
ENST00000465038 (RUNX2-002) 45328323-45547305 protein_coding
ENST00000473041 (RUNX2-006) 45361573-45372055 processed_transcript
ENST00000478660 (RUNX2-009) 45422036-45663872 nonsense_mediated_decay
ENST00000483243 (RUNX2-005) 45328323-45372055 processed_transcript
ENST00000483377 (RUNX2-007) 45328157-45547209 nonsense_mediated_decay
ENST00000576263 (RUNX2-008) 45328727-45664349 protein_coding
ENSG00000196284 (SUPT3H)
suppressor of Ty 3 homolog (S. cerevisiae) 		ENST00000306867 (SUPT3H-201) 44826730-45106015 protein_coding
ENST00000371458 (SUPT3H-004) 44829767-44955510 protein_coding
ENST00000371459 (SUPT3H-006) 44828845-45377933 protein_coding
ENST00000371460 (SUPT3H-005) 44828732-45377933 protein_coding
ENST00000459689 (SUPT3H-003) 45250955-45377423 processed_transcript
ENST00000475057 (SUPT3H-001) 44809317-45377953 nonsense_mediated_decay
ENSG00000219384 (RP11-491H9.3)
 ENST00000405824 (RP11-491H9.3-001) 45158870-45159511 processed_pseudogene
ENSG00000261080 (RP1-166H4.2)
 ENST00000563807 (RP1-166H4.2-001) 45573346-45576770 lincRNA
ENSG00000270900 (NUDT19P4)
nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 4 		ENST00000605501 (NUDT19P4-001) 44898711-44899295 processed_pseudogene
ENSG00000271857 (RP1-244F24.1)
 ENST00000606796 (RP1-244F24.1-001) 45421079-45422005 antisense
ENSG00000276156 (RP11-491H9.4)
 ENST00000616214 (RP11-491H9.4-001) 45097496-45097976 unprocessed_pseudogene
ENSG00000277769 (RBM22P4)
RNA binding motif protein 22 pseudogene 4 		ENST00000613117 (RBM22P4-001) 45098021-45099260 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028T_0001ENSDARG00000002776ENSDART00000026904ENSDART00000141251ENSDART00000141598ENSDART00000143104CIL_00028T_0002ENSG00000124813ENST00000359524ENST00000371432ENST00000371436ENST00000371438ENST00000465038ENST00000473041ENST00000478660ENST00000483243ENST00000483377ENST00000576263ENSG00000196284ENST00000306867ENST00000371458ENST00000371459ENST00000371460ENST00000459689ENST00000475057ENSG00000219384ENST00000405824ENSG00000261080ENST00000563807ENSG00000270900ENST00000605501ENSG00000271857ENST00000606796ENSG00000276156ENST00000616214ENSG00000277769ENST00000613117
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028T_0001ENSDARG00000002776ENSDART00000026904ENSDART00000141598CIL_00028T_0002ENSG00000124813ENST00000359524ENST00000371432ENST00000371436ENST00000371438ENST00000465038ENST00000478660ENST00000483243ENST00000576263ENSG00000196284ENST00000306867ENST00000371458ENST00000371459ENST00000371460ENST00000475057ENSG00000219384ENST00000405824ENSG00000261080ENST00000563807ENSG00000270900ENST00000605501ENSG00000271857ENST00000606796ENSG00000276156ENST00000616214ENSG00000277769ENST00000613117
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002776 ENSDART00000026904 N/A N/A N/A 4.195±0.00 N/A N/A 5.628±0.00 3.016±0.00 1.126±0.00 N/A N/A N/A N/A N/A
ENSDART00000141251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141598 N/A N/A N/A 1.958±0.41 N/A N/A 4.552±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124813 ENST00000359524 0.458±0.00 0.436±0.00 N/A 0.348±0.00 0.515±0.00 0.495±0.00 N/A 0.376±0.27 0.159±0.00 0.692±0.09 N/A 0.299±0.10 0.152±0.05 N/A
ENST00000371432 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 N/A 0.807±0.55 0.131±0.00 0.215±0.12
ENST00000371436 N/A N/A 0.222±0.00 0.486±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371438 N/A N/A N/A N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A 0.244±0.00 N/A N/A
ENST00000465038 N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A 0.571±0.00
ENST00000473041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478660 N/A N/A N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A 0.393±0.00
ENST00000483243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.928±0.00
ENST00000483377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.00 N/A N/A N/A
ENSG00000196284 ENST00000306867 N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A 0.070±0.00 N/A N/A 0.558±0.00 N/A N/A
ENST00000371458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A
ENST00000371459 N/A 0.362±0.00 N/A 0.402±0.00 0.388±0.10 0.700±0.24 0.119±0.00 0.779±0.00 0.089±0.00 0.506±0.17 N/A 0.783±0.29 1.183±0.40 2.609±0.31
ENST00000371460 0.160±0.00 N/A 0.878±0.00 N/A N/A N/A 0.067±0.00 N/A 0.631±0.00 N/A N/A 0.579±0.00 0.512±0.00 N/A
ENST00000459689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475057 1.766±0.00 0.873±0.00 0.410±0.00 4.624±3.40 1.742±0.24 3.794±0.00 0.214±0.02 2.325±0.00 0.660±0.43 1.050±0.07 0.860±0.00 2.129±2.37 1.349±0.18 5.050±0.00
ENSG00000219384 ENST00000405824 N/A N/A N/A N/A N/A N/A 0.189±0.00 0.089±0.00 N/A 1.566±0.00 N/A 0.113±0.00 N/A 0.589±0.00
ENSG00000261080 ENST00000563807 0.055±0.00 0.280±0.00 N/A 0.080±0.00 0.112±0.00 0.096±0.00 0.061±0.00 0.056±0.00 0.114±0.00 0.125±0.00 0.008±0.00 0.052±0.02 0.024±0.00 N/A
ENSG00000270900 ENST00000605501 N/A N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A 0.394±0.00 N/A N/A
ENSG00000271857 ENST00000606796 N/A 0.034±0.00 0.139±0.00 0.159±0.03 0.017±0.00 0.177±0.07 0.016±0.00 0.050±0.00 0.015±0.00 0.344±0.00 0.320±0.00 0.259±0.10 0.058±0.00 0.064±0.00
ENSG00000276156 ENST00000616214 N/A N/A N/A N/A 0.224±0.00 N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000277769 ENST00000613117 0.010±0.00 N/A 0.179±0.00 0.129±0.12 0.059±0.00 N/A 0.031±0.02 N/A 0.310±0.00 0.948±0.00 N/A 0.172±0.25 N/A 0.022±0.00

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