C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196290 NIF3L1 9606 + 2:200889327-200903930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359683 NIF3L1-001 200889388-200903930 protein_coding
  ENST00000409020 NIF3L1-004 200889385-200903930 protein_coding
  ENST00000409129 NIF3L1-009 200889447-200893378 protein_coding
  ENST00000409357 NIF3L1-003 200889415-200903896 protein_coding
  ENST00000409588 NIF3L1-005 200891917-200903925 protein_coding
  ENST00000416651 NIF3L1-201 200891915-200903923 protein_coding
  ENST00000426253 NIF3L1-007 200889327-200895373 protein_coding
  ENST00000436412 NIF3L1-010 200897074-200903923 protein_coding
  ENST00000454952 NIF3L1-008 200889369-200893297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359683ENST00000409020ENST00000409357ENST00000409588ENST00000416651ENST00000426253ENST00000454952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359683 0.949±0.00 2.696±0.00 N/A N/A 2.333±0.00 2.452±0.00 1.643±0.00 1.306±0.49 1.709±0.00 0.290±0.00 N/A 3.789±1.57 3.832±0.55 1.969±0.14
ENST00000409020 1.055±0.00 3.167±0.00 N/A 3.377±1.51 N/A 0.877±0.00 1.149±0.00 N/A N/A N/A 3.051±0.00 3.408±1.93 3.321±1.73 3.742±2.31
ENST00000409357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.776±0.00 1.229±0.00 N/A
ENST00000409588 N/A N/A N/A N/A 2.499±0.00 N/A 2.151±0.00 N/A 2.106±0.00 0.762±0.00 N/A 4.664±0.00 4.377±0.00 N/A
ENST00000416651 N/A N/A N/A N/A N/A 0.573±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426253 N/A N/A N/A N/A N/A N/A N/A N/A 2.577±0.00 1.247±0.00 N/A N/A N/A N/A
ENST00000454952 N/A N/A 2.563±0.00 N/A N/A 1.255±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AV CIL_0002AV_0001 CGP 2:200870907-200903930
CIL_0002AW CIL_0002AW_0001 CGP 2:200889327-200963680

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003934 IEA GTP cyclohydrolase I activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0008134 IPI transcription factor binding
GO:0035998 IEA 7,8-dihydroneopterin 3'-triphosphate biosynthetic process
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045249 nif3l1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000026036 Nif3l1 Ngg1 interacting factor 3-like 1 (S. pombe) protein_coding Mus_musculus

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