C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002AV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000240344-ENSG00000196290 CGP 9606 2:200870907-200903930
GeneTranscriptPositionBiotype
ENSG00000196290 (NIF3L1)
NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 		ENST00000359683 (NIF3L1-001) 200889388-200903930 protein_coding
ENST00000409020 (NIF3L1-004) 200889385-200903930 protein_coding
ENST00000409129 (NIF3L1-009) 200889447-200893378 protein_coding
ENST00000409357 (NIF3L1-003) 200889415-200903896 protein_coding
ENST00000409588 (NIF3L1-005) 200891917-200903925 protein_coding
ENST00000416651 (NIF3L1-201) 200891915-200903923 protein_coding
ENST00000426253 (NIF3L1-007) 200889327-200895373 protein_coding
ENST00000436412 (NIF3L1-010) 200897074-200903923 protein_coding
ENST00000454952 (NIF3L1-008) 200889369-200893297 protein_coding
ENSG00000240344 (PPIL3)
peptidylprolyl isomerase (cyclophilin)-like 3 		ENST00000286175 (PPIL3-001) 200870907-200889269 protein_coding
ENST00000392283 (PPIL3-002) 200870956-200889154 protein_coding
ENST00000409264 (PPIL3-006) 200871213-200889015 protein_coding
ENST00000409361 (PPIL3-007) 200871230-200889136 protein_coding
ENST00000409449 (PPIL3-008) 200871267-200889303 protein_coding
ENST00000415562 (PPIL3-005) 200871152-200887687 nonsense_mediated_decay
ENST00000443398 (PPIL3-011) 200876964-200889266 protein_coding
ENST00000457063 (PPIL3-012) 200881421-200888579 protein_coding
ENST00000463866 (PPIL3-009) 200871374-200881742 retained_intron
ENST00000465823 (PPIL3-003) 200870956-200889276 processed_transcript
ENST00000470442 (PPIL3-014) 200884902-200889046 retained_intron
ENST00000487879 (PPIL3-016) 200885319-200889044 retained_intron
ENST00000492074 (PPIL3-013) 200881422-200889157 processed_transcript
ENST00000497263 (PPIL3-010) 200876942-200889066 processed_transcript
ENST00000497501 (PPIL3-015) 200885297-200889296 processed_transcript
ENSG00000252916 (RNU6-762P)
RNA, U6 small nuclear 762, pseudogene 		ENST00000517107 (RNU6-762P-201) 200899020-200899121 snRNA
CIL_0002AV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026035-ENSMUSG00000026036 CGP 10090 1:58430994-58481816
GeneTranscriptPositionBiotype
ENSMUSG00000026035 (Ppil3)
peptidylprolyl isomerase (cyclophilin)-like 3 		ENSMUST00000081677 (Ppil3-001) 58430997-58445486 protein_coding
ENSMUST00000114345 (Ppil3-002) 58433787-58445369 protein_coding
ENSMUST00000114348 (Ppil3-003) 58430994-58445434 protein_coding
ENSMUST00000117069 (Ppil3-004) 58430994-58445429 protein_coding
ENSMUST00000124550 (Ppil3-005) 58438176-58445176 retained_intron
ENSMUST00000185990 (Ppil3-008) 58434419-58445482 protein_coding
ENSMUST00000186242 (Ppil3-009) 58431020-58432185 processed_transcript
ENSMUST00000188896 (Ppil3-006) 58438830-58440968 retained_intron
ENSMUST00000190048 (Ppil3-007) 58434415-58445439 protein_coding
ENSMUSG00000026036 (Nif3l1)
Ngg1 interacting factor 3-like 1 (S. pombe) 		ENSMUST00000087521 (Nif3l1-001) 58445151-58463456 protein_coding
ENSMUST00000114337 (Nif3l1-002) 58445267-58481816 protein_coding
ENSMUST00000129759 (Nif3l1-004) 58445628-58450507 nonsense_mediated_decay
ENSMUST00000140723 (Nif3l1-005) 58449167-58457800 retained_intron
ENSMUST00000151272 (Nif3l1-003) 58445729-58448050 protein_coding
ENSMUST00000171597 (Nif3l1-201) 58447631-58462266 protein_coding
ENSMUST00000185578 (Nif3l1-007) 58453404-58456188 retained_intron
ENSMUST00000188295 (Nif3l1-008) 58457685-58461384 retained_intron
ENSMUSG00000026037 (Orc2)
origin recognition complex, subunit 2 		ENSMUST00000027198 (Orc2-001) 58462771-58505109 protein_coding
ENSMUST00000114325 (Orc2-002) 58464204-58501416 protein_coding
ENSMUST00000151723 (Orc2-003) 58480311-58481449 retained_intron
ENSMUST00000190695 (Orc2-005) 58483698-58504925 protein_coding
ENSMUST00000191206 (Orc2-004) 58500346-58504955 protein_coding
ENSMUSG00000094245 (Gm23966)
predicted gene, 23966 		ENSMUST00000179823 (Gm23966-201) 58466515-58466621 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AV_0001ENSG00000196290ENST00000359683ENST00000409020ENST00000409129ENST00000409357ENST00000409588ENST00000416651ENST00000426253ENST00000436412ENST00000454952ENSG00000240344ENST00000286175ENST00000392283ENST00000409264ENST00000409361ENST00000409449ENST00000415562ENST00000443398ENST00000457063ENST00000463866ENST00000465823ENST00000470442ENST00000487879ENST00000492074ENST00000497263ENST00000497501ENSG00000252916ENST00000517107CIL_0002AV_0002ENSMUSG00000026035ENSMUST00000081677ENSMUST00000114345ENSMUST00000114348ENSMUST00000117069ENSMUST00000124550ENSMUST00000185990ENSMUST00000186242ENSMUST00000188896ENSMUST00000190048ENSMUSG00000026036ENSMUST00000087521ENSMUST00000114337ENSMUST00000129759ENSMUST00000140723ENSMUST00000151272ENSMUST00000171597ENSMUST00000185578ENSMUST00000188295ENSMUSG00000026037ENSMUST00000027198ENSMUST00000114325ENSMUST00000151723ENSMUST00000190695ENSMUST00000191206ENSMUSG00000094245ENSMUST00000179823
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AV_0001ENSG00000196290ENST00000359683ENST00000409020ENST00000409357ENST00000409588ENST00000416651ENST00000426253ENST00000454952ENSG00000240344ENST00000286175ENST00000392283ENST00000409264ENST00000409361ENST00000409449ENST00000415562ENST00000443398ENST00000457063ENST00000463866ENST00000465823ENST00000470442ENST00000487879ENSG00000252916ENST00000517107CIL_0002AV_0002ENSMUSG00000026035ENSMUST00000081677ENSMUST00000114348ENSMUSG00000026036ENSMUST00000087521ENSMUST00000114337ENSMUST00000171597ENSMUSG00000026037ENSMUST00000027198ENSMUST00000114325ENSMUSG00000094245ENSMUST00000179823
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196290 ENST00000359683 0.949±0.00 2.696±0.00 N/A N/A 2.333±0.00 2.452±0.00 1.643±0.00 1.306±0.49 1.709±0.00 0.290±0.00 N/A 3.789±1.57 3.832±0.55 1.969±0.14
ENST00000409020 1.055±0.00 3.167±0.00 N/A 3.377±1.51 N/A 0.877±0.00 1.149±0.00 N/A N/A N/A 3.051±0.00 3.408±1.93 3.321±1.73 3.742±2.31
ENST00000409129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.776±0.00 1.229±0.00 N/A
ENST00000409588 N/A N/A N/A N/A 2.499±0.00 N/A 2.151±0.00 N/A 2.106±0.00 0.762±0.00 N/A 4.664±0.00 4.377±0.00 N/A
ENST00000416651 N/A N/A N/A N/A N/A 0.573±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426253 N/A N/A N/A N/A N/A N/A N/A N/A 2.577±0.00 1.247±0.00 N/A N/A N/A N/A
ENST00000436412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454952 N/A N/A 2.563±0.00 N/A N/A 1.255±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240344 ENST00000286175 N/A N/A N/A 0.764±0.00 N/A N/A N/A N/A N/A N/A N/A 2.923±0.00 0.605±0.00 N/A
ENST00000392283 1.895±0.00 1.307±0.00 0.964±0.00 3.031±0.45 1.929±0.39 1.560±0.60 1.449±0.34 1.669±0.50 1.412±0.13 1.571±0.00 1.388±0.65 6.074±2.23 3.855±2.23 2.592±0.00
ENST00000409264 2.409±0.00 4.118±0.00 N/A 1.632±0.00 3.014±0.00 N/A 1.540±0.00 3.558±0.00 1.352±0.00 0.985±0.00 N/A 6.442±3.17 1.938±0.00 4.879±0.00
ENST00000409361 N/A N/A N/A 3.474±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409449 N/A N/A 2.112±0.00 N/A N/A 1.936±0.53 1.839±0.00 N/A N/A 1.655±0.00 N/A N/A 2.293±0.00 N/A
ENST00000415562 N/A N/A N/A 4.109±0.00 2.428±0.00 N/A 2.011±0.00 2.064±0.00 2.396±0.00 N/A 1.095±0.00 N/A N/A N/A
ENST00000443398 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.378±0.00 N/A N/A N/A N/A
ENST00000457063 N/A N/A 0.916±0.00 1.801±0.00 N/A N/A N/A N/A 1.448±0.00 N/A N/A N/A N/A N/A
ENST00000463866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.616±0.00
ENST00000465823 N/A N/A N/A N/A N/A 1.145±0.00 N/A N/A N/A N/A N/A 1.433±0.00 0.694±0.00 N/A
ENST00000470442 N/A N/A N/A N/A N/A N/A N/A 1.379±0.00 N/A N/A N/A N/A N/A N/A
ENST00000487879 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.064±0.00 N/A N/A N/A N/A
ENST00000492074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252916 ENST00000517107 N/A 0.389±0.00 N/A N/A 0.372±0.00 N/A N/A 0.746±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026035 ENSMUST00000081677 N/A N/A N/A N/A 8.486±0.00 N/A 5.486±0.00 9.167±0.00 N/A N/A 6.526±0.00 18.285±0.00 N/A 6.638±0.00
ENSMUST00000114345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.980±0.41 N/A N/A N/A
ENSMUST00000117069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026036 ENSMUST00000087521 3.071±0.32 3.509±0.34 2.858±0.00 5.425±0.17 3.117±0.59 3.654±0.00 1.229±0.00 2.367±0.22 2.672±1.40 3.570±0.25 N/A 5.297±1.46 3.207±0.00 3.444±0.28
ENSMUST00000114337 6.940±0.53 5.879±2.00 N/A N/A 5.018±0.80 5.007±1.23 3.172±0.00 3.757±0.74 3.653±0.32 4.292±0.81 N/A 8.097±1.42 N/A N/A
ENSMUST00000129759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171597 6.567±2.01 4.700±0.76 7.351±0.00 10.929±4.57 4.602±1.89 4.499±0.42 2.881±0.57 4.769±1.01 5.404±3.68 3.882±0.29 3.448±0.37 8.972±2.10 8.941±2.77 N/A
ENSMUST00000185578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026037 ENSMUST00000027198 4.166±0.00 N/A 8.911±1.19 8.172±1.32 3.977±0.15 N/A 2.438±0.06 2.740±0.67 13.741±12.35 2.733±0.36 3.349±0.80 7.239±1.99 12.107±5.85 5.689±1.67
ENSMUST00000114325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.086±0.00 N/A
ENSMUST00000151723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000094245 ENSMUST00000179823 N/A N/A N/A 33.175±0.00 N/A N/A N/A N/A 31.593±0.00 N/A N/A 2785.791±2730.11 20.985±0.00 N/A

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