C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glia maturation factor, beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197045 GMFB 9606 - 14:54474484-54489196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358056 GMFB-001 54474485-54489196 protein_coding
  ENST00000553333 GMFB-004 54478106-54488658 protein_coding
  ENST00000553566 GMFB-008 54481395-54488861 processed_transcript
  ENST00000553952 GMFB-003 54483128-54488994 retained_intron
  ENST00000554163 GMFB-006 54477922-54483768 retained_intron
  ENST00000554247 GMFB-005 54477983-54488980 nonsense_mediated_decay
  ENST00000554682 GMFB-007 54481395-54488980 retained_intron
  ENST00000554908 GMFB-002 54474484-54489025 protein_coding
  ENST00000616146 GMFB-201 54474491-54489026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358056ENST00000553952ENST00000554908ENST00000616146
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358056 1.833±0.00 1.531±0.00 4.018±0.00 17.709±6.55 4.646±0.32 6.615±3.40 3.724±1.00 2.551±0.90 5.414±0.65 4.037±2.03 0.692±0.48 7.629±2.02 4.455±1.96 2.683±0.27
ENST00000553952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A
ENST00000554908 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.916±0.00 N/A N/A N/A 0.459±0.00
ENST00000616146 4.732±0.00 2.548±0.00 N/A 12.561±0.00 8.069±0.00 3.361±0.00 N/A 6.362±0.00 N/A 2.154±0.00 N/A 1.649±0.55 1.725±0.00 2.480±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0001 VISTA 14:53920865-54521777
CIL_00090Z CIL_00090Z_0001 VISTA 14:53923660-54524764
CIL_0000HV CIL_0000HV_0001 CGP 14:54423560-54489196
CIL_0000HK CIL_0000HK_0001 CGP 14:54474484-54539309

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0004860 TAS protein kinase inhibitor activity
GO:0004871 TAS signal transducer activity
GO:0005622 IEA intracellular
GO:0006468 TAS protein phosphorylation
GO:0006469 TAS negative regulation of protein kinase activity
GO:0007165 TAS signal transduction
GO:0007399 TAS nervous system development
GO:0007612 IEA learning
GO:0007626 IEA locomotory behavior
GO:0008047 TAS enzyme activator activity
GO:0008083 IEA growth factor activity
GO:0034316 IEA negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0043085 TAS positive regulation of catalytic activity
GO:0071933 IEA Arp2/3 complex binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028327 gmfb glia maturation factor, beta protein_coding Danio_rerio
ENSMUSG00000062014 Gmfb glia maturation factor, beta protein_coding Mus_musculus

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