C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glia maturation factor, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616146 GMFB-201 ENSG00000197045 9606 - 14:54474491-54489026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000616146
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000616146 4.732±0.00 2.548±0.00 12.561±0.00 8.069±0.00 3.361±0.00 6.362±0.00 2.154±0.00 1.649±0.55 1.725±0.00 2.480±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0001 VISTA 14:53920865-54521777
CIL_00090Z CIL_00090Z_0001 VISTA 14:53923660-54524764
CIL_0000HV CIL_0000HV_0001 CGP 14:54423560-54489196
CIL_0000HK CIL_0000HK_0001 CGP 14:54474484-54539309

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0004860 TAS protein kinase inhibitor activity
GO:0004871 TAS signal transducer activity
GO:0005622 IEA intracellular
GO:0006468 TAS protein phosphorylation
GO:0006469 TAS negative regulation of protein kinase activity
GO:0007165 TAS signal transduction
GO:0007399 TAS nervous system development
GO:0008047 TAS enzyme activator activity
GO:0008083 IEA growth factor activity
GO:0034316 IEA negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0043085 TAS positive regulation of catalytic activity
GO:0071933 IEA Arp2/3 complex binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079314 Gmfb-201 protein_coding Mus_musculus 0 1168
ENSMUST00000111817 Gmfb-001 protein_coding Mus_musculus 0 1162
ENSMUST00000145958 Gmfb-002 protein_coding Mus_musculus 0 440

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