C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100528-ENSG00000197045 CGP 9606 14:54423560-54489196
GeneTranscriptPositionBiotype
ENSG00000100528 (CNIH1)
cornichon family AMPA receptor auxiliary protein 1 		ENST00000216416 (CNIH1-001) 54423560-54441431 protein_coding
ENST00000395573 (CNIH1-002) 54426936-54441391 protein_coding
ENST00000553660 (CNIH1-007) 54427425-54441357 protein_coding
ENST00000554683 (CNIH1-004) 54427595-54441344 nonsense_mediated_decay
ENST00000556113 (CNIH1-005) 54430158-54441340 protein_coding
ENST00000557659 (CNIH1-006) 54427329-54441376 nonsense_mediated_decay
ENST00000557690 (CNIH1-003) 54427523-54441391 protein_coding
ENSG00000197045 (GMFB)
glia maturation factor, beta 		ENST00000358056 (GMFB-001) 54474485-54489196 protein_coding
ENST00000553333 (GMFB-004) 54478106-54488658 protein_coding
ENST00000553566 (GMFB-008) 54481395-54488861 processed_transcript
ENST00000553952 (GMFB-003) 54483128-54488994 retained_intron
ENST00000554163 (GMFB-006) 54477922-54483768 retained_intron
ENST00000554247 (GMFB-005) 54477983-54488980 nonsense_mediated_decay
ENST00000554682 (GMFB-007) 54481395-54488980 retained_intron
ENST00000554908 (GMFB-002) 54474484-54489025 protein_coding
ENST00000616146 (GMFB-201) 54474491-54489026 protein_coding
ENSG00000258753 (RP11-794A8.1)
 ENST00000554046 (RP11-794A8.1-001) 54470709-54471218 lincRNA
CIL_0000HV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015759-ENSMUSG00000062014 CGP 10090 14:46775582-46822242
GeneTranscriptPositionBiotype
ENSMUSG00000015759 (Cnih1)
cornichon homolog 1 (Drosophila) 		ENSMUST00000015903 (Cnih1-001) 46775582-46788411 protein_coding
ENSMUST00000146629 (Cnih1-002) 46775582-46788411 nonsense_mediated_decay
ENSMUSG00000062014 (Gmfb)
glia maturation factor, beta 		ENSMUST00000079314 (Gmfb-201) 46808149-46822242 protein_coding
ENSMUST00000111817 (Gmfb-001) 46808149-46822242 protein_coding
ENSMUST00000145958 (Gmfb-002) 46814262-46819575 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HV_0001ENSG00000100528ENST00000216416ENST00000395573ENST00000553660ENST00000554683ENST00000556113ENST00000557659ENST00000557690ENSG00000197045ENST00000358056ENST00000553333ENST00000553566ENST00000553952ENST00000554163ENST00000554247ENST00000554682ENST00000554908ENST00000616146ENSG00000258753ENST00000554046CIL_0000HV_0002ENSMUSG00000015759ENSMUST00000015903ENSMUST00000146629ENSMUSG00000062014ENSMUST00000079314ENSMUST00000111817ENSMUST00000145958
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HV_0001ENSG00000100528ENST00000216416ENST00000395573ENST00000553660ENST00000556113ENST00000557659ENST00000557690ENSG00000197045ENST00000358056ENST00000553952ENST00000554908ENST00000616146ENSG00000258753ENST00000554046CIL_0000HV_0002ENSMUSG00000015759ENSMUST00000015903ENSMUSG00000062014ENSMUST00000079314ENSMUST00000111817ENSMUST00000145958
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100528 ENST00000216416 8.407±0.00 2.190±0.00 1.683±0.00 3.835±0.48 5.853±2.43 2.262±1.31 1.494±0.62 5.747±0.00 7.077±1.86 3.530±0.16 0.747±0.13 4.094±1.31 2.429±0.17 4.190±2.53
ENST00000395573 N/A 6.441±0.00 N/A 5.168±0.00 11.274±0.00 17.490±0.00 5.547±0.00 15.615±0.00 16.944±0.00 7.812±0.00 3.672±2.90 7.039±1.64 12.977±2.53 14.325±0.00
ENST00000553660 N/A 6.690±0.00 2.022±0.00 N/A 7.165±0.00 10.925±4.07 4.961±3.09 14.316±0.00 17.213±0.00 7.594±0.00 6.980±0.00 20.871±9.44 20.782±5.94 20.229±0.00
ENST00000554683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.817±1.22 N/A N/A N/A
ENST00000557659 N/A N/A N/A N/A 4.553±0.00 N/A 1.337±0.00 5.869±0.00 N/A N/A N/A 12.842±4.07 19.030±0.00 12.263±0.00
ENST00000557690 N/A N/A 2.146±0.00 5.001±0.00 N/A N/A 2.318±0.00 7.218±0.00 N/A 5.241±0.00 N/A 8.082±0.00 N/A N/A
ENSG00000197045 ENST00000358056 1.833±0.00 1.531±0.00 4.018±0.00 17.709±6.55 4.646±0.32 6.615±3.40 3.724±1.00 2.551±0.90 5.414±0.65 4.037±2.03 0.692±0.48 7.629±2.02 4.455±1.96 2.683±0.27
ENST00000553333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A
ENST00000554163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554908 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.916±0.00 N/A N/A N/A 0.459±0.00
ENST00000616146 4.732±0.00 2.548±0.00 N/A 12.561±0.00 8.069±0.00 3.361±0.00 N/A 6.362±0.00 N/A 2.154±0.00 N/A 1.649±0.55 1.725±0.00 2.480±0.00
ENSG00000258753 ENST00000554046 N/A N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.229±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015759 ENSMUST00000015903 74.518±11.88 164.757±15.33 35.696±0.95 36.510±2.67 66.214±3.29 48.366±5.58 27.334±3.22 43.205±1.53 41.448±13.70 38.962±2.72 23.717±0.79 61.219±24.38 57.174±20.94 6.217±1.68
ENSMUST00000146629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062014 ENSMUST00000079314 2.030±0.00 2.837±1.39 N/A 2.423±0.00 2.167±0.16 N/A N/A 2.146±0.22 1.174±0.56 2.449±0.20 1.097±0.53 1.962±0.43 2.429±0.57 3.548±1.21
ENSMUST00000111817 9.590±1.13 6.964±0.71 15.355±0.45 16.689±3.02 7.611±2.24 3.616±1.65 4.735±0.57 12.473±0.94 7.158±4.67 13.957±5.02 3.738±0.95 7.955±3.62 18.915±6.25 10.165±1.32
ENSMUST00000145958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.123±7.04

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