C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197045-ENSG00000100532 CGP 9606 14:54474484-54539309
GeneTranscriptPositionBiotype
ENSG00000100532 (CGRRF1)
cell growth regulator with ring finger domain 1 		ENST00000216420 (CGRRF1-001) 54509828-54539309 protein_coding
ENST00000554791 (CGRRF1-009) 54509812-54538281 nonsense_mediated_decay
ENST00000556172 (CGRRF1-005) 54537722-54538614 protein_coding
ENST00000556216 (CGRRF1-002) 54509902-54538616 retained_intron
ENST00000557184 (CGRRF1-008) 54510185-54531117 processed_transcript
ENST00000557317 (CGRRF1-004) 54509906-54530998 protein_coding
ENST00000557429 (CGRRF1-003) 54536073-54538614 retained_intron
ENST00000557512 (CGRRF1-007) 54510126-54538247 processed_transcript
ENST00000557755 (CGRRF1-006) 54509912-54538098 nonsense_mediated_decay
ENSG00000197045 (GMFB)
glia maturation factor, beta 		ENST00000358056 (GMFB-001) 54474485-54489196 protein_coding
ENST00000553333 (GMFB-004) 54478106-54488658 protein_coding
ENST00000553566 (GMFB-008) 54481395-54488861 processed_transcript
ENST00000553952 (GMFB-003) 54483128-54488994 retained_intron
ENST00000554163 (GMFB-006) 54477922-54483768 retained_intron
ENST00000554247 (GMFB-005) 54477983-54488980 nonsense_mediated_decay
ENST00000554682 (GMFB-007) 54481395-54488980 retained_intron
ENST00000554908 (GMFB-002) 54474484-54489025 protein_coding
ENST00000616146 (GMFB-201) 54474491-54489026 protein_coding
CIL_0000HK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062014-ENSMUSG00000055128 CGP 10090 14:46808149-46854193
GeneTranscriptPositionBiotype
ENSMUSG00000055128 (Cgrrf1)
cell growth regulator with ring finger domain 1 		ENSMUST00000068532 (Cgrrf1-001) 46832134-46854193 protein_coding
ENSMUST00000133790 (Cgrrf1-003) 46832244-46848059 retained_intron
ENSMUST00000133989 (Cgrrf1-004) 46832229-46846588 retained_intron
ENSMUST00000140114 (Cgrrf1-002) 46832219-46840412 retained_intron
ENSMUSG00000061510 (Gm10101)
predicted gene 10101 		ENSMUST00000074862 (Gm10101-201) 46829114-46832027 lincRNA
ENSMUST00000181311 (Gm10101-001) 46829109-46832027 lincRNA
ENSMUSG00000062014 (Gmfb)
glia maturation factor, beta 		ENSMUST00000079314 (Gmfb-201) 46808149-46822242 protein_coding
ENSMUST00000111817 (Gmfb-001) 46808149-46822242 protein_coding
ENSMUST00000145958 (Gmfb-002) 46814262-46819575 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HK_0001ENSG00000100532ENST00000216420ENST00000554791ENST00000556172ENST00000556216ENST00000557184ENST00000557317ENST00000557429ENST00000557512ENST00000557755ENSG00000197045ENST00000358056ENST00000553333ENST00000553566ENST00000553952ENST00000554163ENST00000554247ENST00000554682ENST00000554908ENST00000616146CIL_0000HK_0002ENSMUSG00000055128ENSMUST00000068532ENSMUST00000133790ENSMUST00000133989ENSMUST00000140114ENSMUSG00000061510ENSMUST00000074862ENSMUST00000181311ENSMUSG00000062014ENSMUST00000079314ENSMUST00000111817ENSMUST00000145958
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HK_0001ENSG00000100532ENST00000216420ENST00000554791ENST00000556172ENST00000556216ENST00000557429ENST00000557512ENST00000557755ENSG00000197045ENST00000358056ENST00000553952ENST00000554908ENST00000616146CIL_0000HK_0002ENSMUSG00000055128ENSMUST00000068532ENSMUST00000133790ENSMUSG00000061510ENSMUST00000074862ENSMUST00000181311ENSMUSG00000062014ENSMUST00000079314ENSMUST00000111817ENSMUST00000145958
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100532 ENST00000216420 0.538±0.00 1.051±0.00 N/A 2.680±0.75 0.589±0.24 1.023±0.45 0.852±0.27 1.778±1.65 2.015±1.39 1.013±0.00 1.336±0.00 1.973±1.08 0.896±0.37 3.174±0.00
ENST00000554791 1.662±0.00 N/A N/A 4.837±0.00 N/A 2.464±0.00 1.435±0.52 N/A 0.782±0.00 1.661±0.00 N/A 2.778±0.00 4.258±0.00 13.460±5.22
ENST00000556172 2.209±0.00 4.113±0.00 N/A 4.917±2.20 2.881±1.51 3.755±0.00 2.143±0.00 5.695±0.00 1.056±0.00 2.641±0.16 4.199±0.00 3.006±2.41 2.138±0.73 10.816±3.98
ENST00000556216 N/A N/A 0.129±0.00 N/A N/A 0.391±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557429 N/A 0.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.241±0.00 N/A N/A
ENST00000557512 2.180±0.00 3.818±0.00 N/A 6.122±0.00 2.794±0.00 2.863±0.00 1.204±0.00 3.908±0.00 0.557±0.00 1.109±0.00 5.198±0.00 4.236±0.00 2.048±0.82 7.324±1.90
ENST00000557755 N/A N/A 0.392±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197045 ENST00000358056 1.833±0.00 1.531±0.00 4.018±0.00 17.709±6.55 4.646±0.32 6.615±3.40 3.724±1.00 2.551±0.90 5.414±0.65 4.037±2.03 0.692±0.48 7.629±2.02 4.455±1.96 2.683±0.27
ENST00000553333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A
ENST00000554163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554908 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.916±0.00 N/A N/A N/A 0.459±0.00
ENST00000616146 4.732±0.00 2.548±0.00 N/A 12.561±0.00 8.069±0.00 3.361±0.00 N/A 6.362±0.00 N/A 2.154±0.00 N/A 1.649±0.55 1.725±0.00 2.480±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055128 ENSMUST00000068532 12.525±3.21 11.809±3.70 21.050±2.55 3.519±0.91 11.410±1.49 12.412±3.75 8.938±0.46 17.141±3.11 13.529±4.62 15.540±4.79 26.123±1.16 7.971±2.56 10.602±4.66 32.598±7.52
ENSMUST00000133790 N/A N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A N/A N/A 0.458±0.18 N/A N/A
ENSMUST00000133989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061510 ENSMUST00000074862 0.435±0.08 0.862±0.35 0.412±0.09 0.175±0.11 2.232±0.13 1.415±0.37 0.071±0.01 0.195±0.13 0.614±0.48 0.644±0.10 0.059±0.03 1.036±0.82 0.181±0.10 N/A
ENSMUST00000181311 0.051±0.01 0.640±0.32 N/A 0.182±0.05 1.914±0.21 1.505±0.76 0.063±0.07 0.072±0.01 0.118±0.08 N/A 0.028±0.02 1.141±0.79 0.054±0.02 0.460±0.17
ENSMUSG00000062014 ENSMUST00000079314 2.030±0.00 2.837±1.39 N/A 2.423±0.00 2.167±0.16 N/A N/A 2.146±0.22 1.174±0.56 2.449±0.20 1.097±0.53 1.962±0.43 2.429±0.57 3.548±1.21
ENSMUST00000111817 9.590±1.13 6.964±0.71 15.355±0.45 16.689±3.02 7.611±2.24 3.616±1.65 4.735±0.57 12.473±0.94 7.158±4.67 13.957±5.02 3.738±0.95 7.955±3.62 18.915±6.25 10.165±1.32
ENSMUST00000145958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.123±7.04

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